Affine Alignment
 
Alignment between HOXD8 (top ENST00000313173.6 290aa) and HOXB7 (bottom ENST00000239165.9 217aa) score 6251

002 SSYFVNPLYSKYKAAAAAAAAAGEAINPTYYDCHFAPEVGGRHAAAAAALQLYGNSAAGF 061
    | |+ | |+||| |+++  |       |    | ||                        
003 SLYYANTLFSKYPASSSVFATGA---FPEQTSCAFA------------------------ 035

062 PHAPPQAHAHPHPSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPP 121
               +|  |  | | |       +  +||||  |   |+|             
036 ----------SNPQRPGYGAGSGASFAASMQGLYPGGGGMAG--QSA------------- 070

122 PPCGGIACHG---EPAKFYGYDNLQRQPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQ 178
        |+   |   ||+ |    |+   |    +|    |   |   ++|   |  |    
071 ---AGVYAAGYGLEPSSF----NMHCAPF---EQNLSGVCPGDSAKAAG-AKEQRDSDLA 119

179 SSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTE 238
    + |  +++||||  +   |+||||||+|+||||||||| +| ||||+||||++| | |||
120 AESNFRIYPWMR-SSGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTE 178

239 RQVKIWFQNRRMKWKKENNKDKFPVSRQEVKDGETKKEAQELEED 283
    ||+|||||||||||||| ||   | +      |+ + ||+| ||+
179 RQIKIWFQNRRMKWKKE-NKTAGPGT-----TGQDRAEAEEEEEE 217