Affine Alignment
 
Alignment between ZNF540 (top ENST00000316433.9 660aa) and ZNF879 (bottom ENST00000444149.7 563aa) score 25707

006 VTFRDVAIDFSQKEWECLDTTQRKLYRDVMLENYNNLVSLGYSGSKPDVITLLEQGKEPC 065
    |||||||+ ||| ||  ||+ || |||+||||||+ |||||   ||| ||+ ||||++| 
014 VTFRDVAVFFSQDEWLHLDSAQRALYREVMLENYSILVSLGILFSKPKVISQLEQGEDPW 073

066 VVARDVTGRQCPGLLSRHKTKKLSSEKDIHEISLSKESIIEKSKTLRLKGSIFRNEWQNK 125
    +|   |      |  |   |  + |+++  |+   |+ ||+ +   +|+       + |+
074 MVESGVPQGAHLGWESLFGT--IVSKEENQEV--MKKLIIDGTFDFKLE-----KTYINE 124

126 SEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNSEKSCDSHLVQHGKIDSDV 185
     + | ||| | |  |+  +  ||+    |  ||   +          | |++  +| |  
125 DKLEKQQGKKNRLFSKVLVTIKKVY--MKERSFKGVE--FGKNLGLKSSLIRKPRIVSRG 180

186 KHDCKECGSTFNNVYQLTLHQ-KIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGEKPYE 244
    +    +        | +   |  ++|  |  ||  |||+| ||  |+ ||| ||||| |+
181 RRPRSQ-------QYSVLFKQLGVNTVRKCYKCNICGKIFLHSSSLSKHQRIHTGEKLYK 233

245 CQECGKTFTLYPQLNRHQKIHTGKKPYMCKKCDKGFFSRLELTQHKRIHTGKKSYECKEC 304
    |+|| | |+    | +| ++|||+|||+| +| | |     |  |+|+|||++ |+||||
234 CKECRKAFSQSSSLTQHLRVHTGEKPYICSECGKAFSFTTSLIGHQRMHTGERPYKCKEC 293

305 GKVFQLIFYFKEHERIHTGKKPYECKECGKAFSVCGQLTRHQKIHTGVKPYECKECGKTF 364
    || |+       |+|||||+|||+| |||+||| |  | +| +|||| ||||| +||| |
294 GKTFKGSSSLNNHQRIHTGEKPYKCNECGRAFSQCSSLIQHHRIHTGEKPYECTQCGKAF 353

365 RLSFYLTEHRRTHAGKKPYECKECGKSFNVRGQLNRHKTIHTGIKPFACKVCEKAFSYSG 424
         |+ | | | |+||+ | |||| |+    |  |+ |||| ||+||| | |||| | 
354 TSISRLSRHHRIHTGEKPFHCNECGKVFSYHSALIIHQRIHTGEKPYACKECGKAFSQSS 413

425 DLRVHSRIHTGEKPYECKECGKAFMLRSVLTEHQRLHTGVKPYECKECGKTFRVRSQISL 484
     |  | |||||||||+| ||||||   | |  | |+||| ||| |||||| |   | ++ 
414 ALIQHQRIHTGEKPYKCNECGKAFSWISRLNIHHRIHTGEKPYNCKECGKAFSSHSGVNT 473

485 HKKIHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKPYKCKECGKAFIRRGNLKEHLKI 544
    |+||||  |||||  | | |     | +||||||||||| || ||||| +  +|  |++|
474 HRKIHTGEKPYKCNDCEKAFNQSSALIQHQRIHTGEKPYNCKVCGKAFRQSSSLMTHMRI 533

545 HSGLKPYDCKECGKSFSRRGQFTEHQKIH 573
    |+| ||| ||||||+||+    | ||+ |
534 HTGEKPYKCKECGKAFSQSSSLTNHQRTH 562