Affine Alignment
 
Alignment between IRX3 (top ENST00000329734.4 501aa) and IRX2 (bottom ENST00000302057.6 471aa) score 11001

001 MSFPQLGYQYIRPLYPSERPGAAGGSGGSAGARGGLGAGASELNASGSLSNVLSSVYGAP 060
    ||+|| || |       + ||+       |     | |  ||  |  +  +  |     |
001 MSYPQ-GYLY-------QAPGSLALYSCPAYGASALAAPRSEELARSASGSAFSPY---P 049

061 YAAAAAAAAAQGYGAFLPYAAELPI----FPQ-LGAQYELKDSPGV-----QHPAAAAAF 110
     +||  | || |+|+ | |+|+       ||  +|| |+   + |+      ||  +||+
050 GSAAFTAQAATGFGSPLQYSADAAAAAAGFPSYMGAPYD-AHTTGMTGAISYHPYGSAAY 108

111 PHPHPAFYPYGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMT 170
    |           ||  ||+  |||||++|+||||||||||||||||||||||||||||||
109 P-----------YQLNDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMT 157

171 LTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEE 230
    ||||||||||||||||||||||||||+++++|    |     +||  |+     |   |+
158 LTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDEGDATRSKDESPDKAQEGTETSAED 217

231 EELGGEEEDTGGEGLADDDEDEEIDLENLDGAATEPELSLAGAARRD--GDLGLGPISDS 288
    | +         + | |     | | | |   | +| |  +|+  +|   ||      + 
218 EGI-----SLHVDSLTDHSCSAESDGEKLPCRAGDP-LCESGSECKDKYDDL------ED 265

289 KNSDSEDSSEGLEDRPLPVLSL------AP--APPPVAVASPSLPSPPVS-LDPCAPAPA 339
       | |+   ||   | || |       ||  +||| |       +|  |   | || ||
266 DEDDDEEGERGLAP-PKPVTSSPLTGLEAPLLSPPPEAAPRGGRKTPQGSRTSPGAPPPA 324

340 PASALQKPKIWSLAETATSPDNPRRSPPGAGGSPPG--AAVAPSALQLSPAAAAAAAHRL 397
          |||+||||| |||        || |  |||  || ||++    |  +   |  |
325 -----SKPKLWSLAEIATSDLKQPSLGPGCG--PPGLPAAAAPASTGAPPGGSPYPASPL 377

398 VSAPLGKFPAWTNRPFPGPPPGPRLHPLSLLGSAPPHLLGLPGAAGHPAAAAAFARPAEP 457
    +  ||     +   || |          +| |     ||    ||  |  |   |  |  
378 LGRPL-----YYTSPFYGNYTNYGNLNAALQGQG---LLRYNSAAAAPGEALHTAPKAAS 429

458 EGGTDRCSALEVEKKLLKTAFQP 480
    + |      ||   +     ++|
430 DAGKAGAHPLESHYRSPGGGYEP 452