Affine Alignment
 
Alignment between IRX3 (top ENST00000329734.4 501aa) and IRX5 (bottom ENST00000394636.9 483aa) score 11039

001 MSFPQLGYQYIRPLYPSERPGAAGGSGGSAGARGGLGAGASELNASGSLSNVLSSVYGAP 060
    ||+|| || |     ||           |     |        ++|||          +|
001 MSYPQ-GYLY----QPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAF--------SP 047

061 YAAAAA-AAAAQGYGAFLPYAAELPIFPQLGAQYELKDSPGVQHPAAAAAFPHPHPAFYP 119
    || + |  | + || + | | |+ |      |      ||    |  | +  + ||   |
048 YAGSTAFTAPSPGYNSHLQYGAD-PAAAAAAAFSSYVGSPYDHTPGMAGSLGY-HPYAAP 105

120 YGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 179
     | | +|||+  |||||++|+|||||||||||||||||||||||||||||||||||||||
106 LGSYPYGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA 165

180 NARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELGGEEED 239
    |||||||||||||| ||+|+++|      + |+ ||+| ++   +  + |  | || |+ 
166 NARRRLKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDKG-DPEGPEAGGAEQK 224

240 --TGGEGL------ADDDEDEEIDLENLDGAATEPEL-SLAGAARRDGDLGLGPISDSKN 290
      +| | |      |  + +  +   +     +|  | +| |  |  |    || +    
225 AASGCERLQGPPTPAGKETEGSLSDSDFKEPPSEGRLDALQGPPRTGGPSPAGPAAARLA 284

291 SDSEDSSEGLEDRPLPVLSLAPAPPPVAVASPSLPSPPVSLDPCAPAPAPASALQKPKIW 350
     |             |  + || | | |   |  |  | |+    | | | + | |||+|
285 EDPAPH--------YPAGAPAPGPHPAAGEVPPGPGGP-SVIHSPPPPPPPAVLAKPKLW 335

351 SLAETATSPDNPRRSPPGAGGSP----PGAAVAPSALQLSPAAAAAAAHRLVSA----PL 402
    |||| ||| |  +    |  |||    ||  +|  ||  | |+ | |  |  ||    | 
336 SLAEIATSSDKVKDGGGGNEGSPCPPCPG-PIAGQALGGSRASPAPAPSRSPSAQCPFPG 394

403 GK------------FPAWTN-------RPFPGPPPGPRLHP 424
    |             +| +||          ||| |||   |
395 GTVLSRPLYYTAPFYPGYTNYGSFGHLHGHPGPGPGPTTGP 435