Affine Alignment
 
Alignment between ZBTB42 (top ENST00000342537.8 422aa) and ZKSCAN3 (bottom ENST00000252211.7 538aa) score 4579

200 RVHPPCVLQTPLCSQRQPGAQPLVKDERD-------SLSEQEESSSSRSPHSP--PKPPP 250
    +|    +  ||  +|+      | +||+        || +++++ |   | +   |+   
215 KVEDVALTLTPEWTQQDSSQGNLCRDEKQENHGSLVSLGDEKQTKSRDLPPAEELPEKEH 274

251 VPAAKGLVVGLQPLPLSGEGSRELELGAGRLASEDELGPGGPLCICPLCSKLFPSSHVLQ 310
       +  |   +  +|   |   +     |||  + +   ||   ||  | | |  |  | 
275 GKISCHLREDIAQIPTCAEAGEQ----EGRLQRKQKNATGGRRHICHECGKSFAQSSGLS 330

311 LHLSAHFRER-----DSTRARLSPD----------GVAP-TCPLCGKTFSCTYTLKRHER 354
     |   |  |+     +  +| +             |  |  |  ||| || +  | +|+|
331 KHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQR 390

355 THSGEKPYTCVQCGKSFQYSHNLSRHTVVHTREKPHACRWCERRFTQSGDLYRHVRKFHC 414
    ||+||||| |  |||+|  | +|  |  +|| |||+ |  | + | +|  | || ++ | 
391 THTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRH-QRIHT 449

415 G 415
    |
450 G 450