Affine Alignment
 
Alignment between MEGF6 (top ENST00000356575.9 1541aa) and JAG1 (bottom ENST00000254958.10 1218aa) score 12274

0773 CPEGRWGLGCQEICPACQ----HAARCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQT 0828
     | +  +| || + |        | | || + |   |+ |++|  |            |+ 
0187 CDDYYYGFGCNKFCRPRDDFFGHYA-CD-QNGNKTCMEGWMGPECNRAI--------CRQ 0236

0829 RCSCANDGHCHPATGHCSCAPGWTGFSCQRA------------------CDTGHWGPDCS 0870
      ||    | |    | | |  || |  | +                   |+|   |  | 
0237 GCS-PKHGSC-KLPGDCRCQYGWQGLYCDKCIPHPGCVHGICNEPWQCLCETNWGGQLCD 0294

0871 HPCNCSAGHGSCDAISGLCLCEAGYVGP-RCEQQCPQGHFGPGC---EQRC---QCQHGA 0923
        |    |  |    | |       || + +  ||+|+ || |   |  |    | +  
0295 KDLNYCGTHQPC-LNGGTC----SNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRG 0349

0924 ACDHVS--GACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAAC-DAVNG-SCLCPA 0979
     +|   |    | |  || |  |          +|  |  ||+ |  | | |||  |+|| 
0350 SCKETSLGFECECSPGWTGPTCS-------TNIDDCSPNNCSHGGTCQDLVNGFKCVCPP 0402

0980 GRRGPRCAETCPAHTYGHNCSQACACFNGASCDPVHGQ--CHCAPGWMGPSCLQACPAGL 1037
        |  |           |  +|  | |  ||  +     | | ||||| +|        
0403 QWTGKTC-------QLDANECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNC-------- 0447

1038 YGDNCRHSCL--CQNGGTC-DPVSGH-CACPEGWAGLACEK---ECLPRDVRAGCRHSGG 1090
       |   + ||  |||  +| | |+|+ | || |+||  ||+   ||           |  
0448 --DININDCLGQCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECA----------SNP 0495

1091 CLNGGLCDPHTGR--CLCPAGWTGDKCQ--------SPCLRG--WFGEACAQRCSCP--- 1135
     ||||| |     |  |||| |++|+ ||        +||  |   +  |    | ||   
0496 CLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNPCQNGAQCYNRASDYFCKCPEDY 0555

1136 PGAACHHVTGACRCPPGFTGSGCEQACPPGSFGED----CAQMCQCPGENPACHPATG-- 1189
      |  | |+   ||  |      |  |       |      + +|   | +  |   +|  
0556 EGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVC---GPHGKCKSQSGGK 0612

1190 -TCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGGSCDAATGA--CRCPTGFLGTDCN 1246
      || |  |+ |  | +        |       | |||+|     +  | |  |+ |  | 
0613 FTCDCNKGFTGTYCHENINDCESNP-------CRNGGTCIDGVNSYKCICSDGWEGAYCE 0665

1247 LTCPQGRFGPNCTHVCGCGQGAACDPVTGT--CLCPPGRAGVRCERGCPQNRFGVGCEHT 1304
              |       |  |  |  +     | |  |  |  |     |      |+  
0666 TNINDCSQNP-------CHNGGTCRDLVNDFYCDCKNGWKGKTCHSRDSQ------CDE- 0711

1305 CSCRNGGLCHASNGS--CSCGLGWTGRHCELACPPGRYGAACHLECSCHNNSTC--EPAT 1360
      +| ||| |+    +  | |  || |  | +|       ++| |   |||  ||     +
0712 ATCNNGGTCYDEGDAFKCMCPGGWEGTTCNIA-----RNSSC-LPNPCHNGGTCVVNGES 0765

1361 GTCRCGPGFYGQAC---EHPCPPGFHGAGCQGLCWCQHGAPCDPISGRCLCPAGFHGHFC 1417
      || |  |+ |  |    + | |                 ||   || |+   | + + |
0766 FTCVCKEGWEGPICAQNTNDCSP----------------HPCYN-SGTCV--DGDNWYRC 0806

1418 ERGCEPGSFGEGCH------QRCDCDGGAPC-DPVTGL-CLCPPGRSGATCNLDCRRGQF 1469
     |  | ||  |  |       |   |  || | | + |  |+|||| ||| |     |   
0807 E--CAPGFAGPDCRININECQSSPCAFGATCVDEINGYRCVCPPGHSGAKCQEVSGR--- 0861

1470 GPSCTLHCDCGGGADCDPVSGQCHCVDG 1497
      |  |+      ||  |     | |++|
0862 -PCITMGSVIPDGAKWDDDCNTCQCLNG 0888