Affine Alignment
 
Alignment between BCL11B (top ENST00000357195.8 894aa) and BCL11A (bottom ENST00000642384.2 835aa) score 49780

001 MSRRKQGNPQHLSQRELITPEADHVEAAILEEDEGLEIEEPSGLGLMVGGPDPDLLTCGQ 060
    ||||||| |||||+||  +||      ||| +||     +   ||   |  | |||||||
001 MSRRKQGKPQHLSKRE-FSPEP---LEAILTDDE----PDHGPLGAPEG--DHDLLTCGQ 050

061 CQMNFPLGDILVFIEHKRKQCGGSLGACYDKALDKDSPPPSSRSELRKVSEPVEIGIQVT 120
    |||||||||||+||||||||| |||  | +||+||  ||  |  |++| | |||+|||||
051 CQMNFPLGDILIFIEHKRKQCNGSL--CLEKAVDK--PPSPSPIEMKKASNPVEVGIQVT 106

121 PDEDDHLLSPTKGICPKQENIAGPCRPAQLPAVAPIAASSHPHSSVITSPLRALGALPPC 180
    |++|| | + ++|||||||+||                    |   ++||  | ||| | 
107 PEDDDCLSTSSRGICPKQEHIADKLL----------------HWRGLSSPRSAHGALIP- 149

181 LPLPCCSARPVSGDGTQGEGQTEAPFGCQCQLSGKDEPSSYICTTCKQPFNSAWFLLQHA 240
                   | |     || |  |    ||||||| |||||||| |||||||||
150 ---------------TPGMSAEYAPQGI-C----KDEPSSYTCTTCKQPFTSAWFLLQHA 189

241 QNTHGFRIYLEPGPASSSLTPRLTIPPPLGPEAVAQSPLMNF-LGDSNPFNLLRMTGPIL 299
    ||||| |||||     | ||||+ ||  || |  +| ||    + |+|||||||+ | + 
190 QNTHGLRIYLE-SEHGSPLTPRVGIPSGLGAECPSQPPLHGIHIADNNPFNLLRIPGSVS 248

300 RDHPGFGEGRLPGTPPLFSPPPRHHLDPH---RLSAEEMGLVAQHPSAFDRVMRLNPMAI 356
    |+  |  ||| | ||||||||||||||||   || |||| |   ||||||||+||||||+
249 REASGLAEGRFPPTPPLFSPPPRHHLDPHRIERLGAEEMALATHHPSAFDRVLRLNPMAM 308

357 DSPAMDFSRRLRELAGNSSTPPPVSPGRGNPMHRLLNPFQPSPKSPFLSTPPLPPMPPGG 416
    + |||||||||||||||+|+ ||+|||| +|| ||| ||||  | |||+||||||+    
309 EPPAMDFSRRLRELAGNTSS-PPLSPGRPSPMQRLLQPFQPGSKPPFLATPPLPPL-QSA 366

417 TPPPQPPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKT 476
     || ||| ||||||||||||||||||+|||||||||||||| ||||||+|||||||||||
367 PPPSQPPVKSKSCEFCGKTFKFQSNLVVHRRSHTGEKPYKCNLCDHACTQASKLKRHMKT 426

477 HMHKAGSLAGRSDDGLSAASSPEPGTSELAG---EGLKAADGDFRHHESDPSL----GHE 529
    ||||+  +  +|||||| |||||||||+| |     ||+    |+  |+||+|    | |
427 HMHKSSPMTVKSDDGLSTASSPEPGTSDLVGSASSALKSVVAKFK-SENDPNLIPENGDE 485

530 PEEED----EEEEEEEEELLLENESRPESSFSMDSELSRNRENGG-GGVPGVPGAGGGAA 584
     ||||    ||||||||| | |+| | +  | +  | +|+ ||   | | ||    |  +
486 EEEEDDEEEEEEEEEEEEELTESE-RVDYGFGLSLEAARHHENSSRGAVVGV----GDES 540

585 KALADEKALVLGKVMENVGLGALPQYGE----LLADKQKRGAFLKRAAGGGDAGDDDDAG 640
    +|| |        ||+ + | ++  + |    +| +| |||  |  | |  |  |+|   
541 RALPD--------VMQGMVLSSMQHFSEAFHQVLGEKHKRG-HLAEAEGHRDTCDEDSVA 591

641 GCGDAGAGGAVNGRGGGFAPGTEPFPGLFPRKPAPLPSP-GLNSAAKRIKVEKDLELPPA 699
    |  |    | ||||  | +||     ||   |   | ||  |+  +||||+||+ +||||
592 GESDRIDDGTVNGR--GCSPGESASGGL--SKKLLLGSPSSLSPFSKRIKLEKEFDLPPA 647

700 ALIPSENVYSQWLVGYAASRHFMKDPFLGFTDARQSPFATSSEHSSENGSLRFSTPPGDL 759
    |+  +|||||||| ||||||  +||||| | |+||||||+||||||||||||||||||+ 
648 AMPNTENVYSQWLAGYAASRQ-LKDPFLSFGDSRQSPFASSSEHSSENGSLRFSTPPGE- 705

760 LDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHT 819
    ||||+|||||| |||||||+ |||||||||||||||||||||||||||||||||||||||
706 LDGGISGRSGTGSGGSTPHISGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHT 765

820 GERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMKKWHGE 879
    |||||||||||||||||||||||||||||+||+||+|+||+||||||||||||||||| +
766 GERPYKCELCNYACAQSSKLTRHMKTHGQVGKDVYKCEICKMPFSVYSTLEKHMKKWHSD 825

880 HLLTNDVKIE 889
     +| ||+| |
826 RVLNNDIKTE 835