Affine Alignment
 
Alignment between HOXA4 (top ENST00000360046.10 320aa) and HOXA2 (bottom ENST00000222718.7 376aa) score 4636

140 LPPPLQ---PRAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPVVYP 196
    +||| +   |   | + ||        |  |||             ||+     +|  ||
048 IPPPFEQTIPSLNPGSHPRHGAGGRPKPS-PAGSRG----------SPVPAGALQPPEYP 096

197 WMKK----------------IHVSAVNPSY------------NGGEPKRSRTAYTRQQVL 228
    |||+                   +|  |+             +||  +| |||||  |+|
097 WMKEKKAAKKTALLPAAAAAATAAATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLL 156

229 ELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272
    |||||||||+|| | ||+|||  | |+|||||+|||||||| |+
157 ELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 200