Affine Alignment
 
Alignment between CADM3 (top ENST00000368125.9 398aa) and L1CAM (bottom ENST00000370060.7 1257aa) score 2280

046 VVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISI----SNVA 101
    + |||+     +   +|+   +  ++|  |  |       |  +||  | +|    || |
053 ISLKCEASGKPEVQFRWT---RDGVHFKPKEELG----VTVYQSPHSGSFTITGNNSNFA 105

102 LADEGEYTCSIFTMPVRTAKS---LVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSK 158
       +| | |   +  + || |    +   | |+ |  |     + | ++  | |    | 
106 QRFQGIYRC-FASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSA 164

159 PAARLTWRKGDQELH-GEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLK 217
       |+ |    + ||  +  |+    ||  +  +      |   |+ +  +|  +    +
165 EPLRIYW-MNSKILHIKQDERVTMGQNGNLYFAN------VLTSDNHSDYICHAHFPGTR 217

218 GADRSTSQRIEVLYTPTAMIR-PDPPHPR---------EGQKLLLHCEGRGNPVPQQYLW 267
       +     + |  | + + | |    |          +|| |+| |   | | |     
218 TIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWL 277

268 EKEGSVPPLKMTQES---ALIFPFLNKSDSGTYGCTATSNMGSYK-AYY 312
       | +|  ++| ++    |    + + | | | | | +++|| + |||
278 RPSGPMPADRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYY 326