Affine Alignment
 
Alignment between L1CAM (top ENST00000370060.7 1257aa) and MDGA1 (bottom ENST00000434837.8 955aa) score 4180

020 IQIPEEYEGHHVMEPPVITEQ--SPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFK 077
    +  | + +  |  +  |+ |   | |   +   | + |+|  +| |  | |||+      
021 VYAPAQAQIVHAGQACVVKEDNISERVYTIREGDTLMLQCLVTGHPRPQVRWTKTA---- 076

078 PKEELGVTVYQSPHSGSFTITGNNSNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPK 137
         |    +   +  |  |      |+   | | | | | +|      ||+  +   +
077 -----GSASDKFQETSVFNETLRIERIARTQGGRYYCKAENGVGVPAIKSIRVDVQYLDE 131

138 ---WPKETVKPV--EVEEGESVVLPCNPPPSAEPLRIYW-MNSKILHIKQDERV------ 185
          +||  |     + ++| | |    |  | |  |   |  |   ||  |      
132 PMLTVHQTVSDVRGNFYQEKTVFLRCT-VNSNPPARFIWKRGSDTLSHSQDNGVDIYEPL 190

186 -TMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTI--IQKEPIDLRVKATNSMIDRKPRL 242
     | |+   |   |+   | ++ | |       | +  |  + |  |+  | +     | |
191 YTQGETKVLKLKNLRPQD-YASYTCQV---SVRNVCGIPDKAITFRLTNTTA----PPAL 242

243 LFPTNSSSHLVALQGQPLVLEC-IAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLLK 301
        | +  ||   |+ + ++| +  | | | ++|    ||+|   +       || +  
243 KLSVNET--LVVNPGENVTVQCLLTGGDPLPQLQWSHGPGPLPLGALA---QGGTLSIPS 297

302 VGEEDDGEYRCLAENSLGS---------ARHAYYVTVEAAPYWLHKPQSHLYGPGETARL 352
    |   | | | | | |++|+          |     | +  |  +   +|     |+  +|
298 VQARDSGYYNCTATNNVGNPAKKTVNLLVRSMKNATFQITPDVI--KESENIQLGQDLKL 355

353 DCQVQGRPQPEVT--WRINGIPVEELAK------DQKYRIQRGALILSNVQPSDTMVTQC 404
     | |   || +||  |  || |     +      | +      +| | ++  ||     |
356 SCHVDAVPQEKVTYQWFKNGKPARMSKRLLVTRNDPELPAVTSSLELIDLHFSDYGTYLC 415

405 EARNRHGL----LLANAYIYVVQLPAKILTADNQTYMAV-QGSTAYLLCKAFGAPVPSVQ 459
     | +  |     |     |    +|  |     +  + | +|| | | |+  | | | | 
416 MA-SFPGAPVPDLSVEVNISSETVPPTISVPKGRAVVTVREGSPAELQCEVRGKPRPPVL 474

460 W--LDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQN-NV---TIMANLK 513
    |  +|++   +          +| | +  +  + +| | |  |     ||        | 
475 WSRVDKEAALLPSGLPLEETPDGKLRLERVSRDMSGTYRCQTARYNGFNVRPREAQVQLN 534

514 VKDATQITQGPRSTIEKKGSRVTFTCQ-ASFDPSLQPSITWRGDGRDL--QELGDSDKYF 570
    |+   ++    +   +  |  |   |      |    |  ||  |+ |    +  +    
535 VQFPPEVEPSSQDVRQALGRPVLLRCSLLRGSPQRIASAVWRFKGQLLPPPPVVPAAAEA 594

571 IEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVL-----SDLHL 625
     +   | + ++     |+| |  | +   | | | |  | +    |         +  | 
595 PDHAELRLDAVTRDSSGSYECSVSND---VGSAACLFQVSAKAYSPEFYFDTPNPTRSHK 651

626 LTQSQVRV-SWSPAE-DHNAPIEKYDIEFE--DKEMAPEKWYSLGKVPGNQ----TSTTL 677
    |+++   |  |+  | |   |+  | +     ++  |  |   + +|   |      | |
652 LSKNYSYVLQWTQREPDAVDPVLNYRLSIRQLNQHNAVVKAIPVRRVEKGQLLEYILTDL 711

678 KLSPYVHYTFRVTAINKYGPGE 699
    ++ |+  |  |+|    +| |+
712 RV-PH-SYEVRLTPYTTFGAGD 731