Affine Alignment
 
Alignment between BARHL2 (top ENST00000370445.5 387aa) and BARHL1 (bottom ENST00000263610.7 327aa) score 15485

003 MEGASGSSFGIDTILSSASSGSPGMMNGDFRPLGEARTADFRSQATPSPCSEIDTVGTAP 062
    |||++|  ||||+|||   +||| +  ||  ||      | ||    || ||  +  ++|
001 MEGSNG--FGIDSILSH-RAGSPALPKGD--PL----LGDCRSPLELSPRSESSSDCSSP 051

063 SSPISVTMEPPEPHLVADATQHHHHLHHSQQPPPPAAAPTQSLQPLPQQQQPLPPQQPPP 122
    +||    +|   |                     |  |    |    |            
052 ASPGRDCLETGTPR--------------------PGGASGPGLDSHLQ------------ 079

123 PPPQQLGSAASAPRTSTSSFLIKDILGDSKPLAACAPYSTS--VSSPHHTPKQESNAVHE 180
      | || || +  || ||||||+||| | ||||||||||+|   ++|    +  + |   
080 --PGQL-SAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQPAAPEPGGRLAAKAA-- 134

181 SFRPKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRKARTAFS 240
            || + ||||   + |    +  ||||||||+|||+||||| ||||||||||+
135 --------EDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLKKPRKARTAFT 186

241 DHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAE 300
    |||| ||||||||||||||||||+|||+||||||||||||||||||||||||||||||||
187 DHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAE 246

301 AGNYSALQRMFPSPYFYHPSLLGSMDSTTAAAAAAAMYSSMYRTPPAPHPQLQRPLVPRV 360
    |||||||||||||||||  ||+ ++|        ||+|  +|| | || | ||||||||+
247 AGNYSALQRMFPSPYFYPQSLVSNLD------PGAALY--LYRGPSAPPPALQRPLVPRI 298

361 LIHGLGPGGQ--PALNPLSSPIPGTPHPR 387
    |||||    +  | | ||+  +|    ||
299 LIHGLQGASEPPPPLPPLAGVLPRAAQPR 327