Affine Alignment
 
Alignment between KCNB1 (top ENST00000371741.6 858aa) and KCNQ3 (bottom ENST00000388996.10 872aa) score 3819

175 LWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQSLDEFGQSTDNPQLAHVEA 234
    ++| ||+|       +|    +  |||  + |++     | +  |+ ++     |  +| 
111 IYDALERPRGWA---LLYHALVFLIVLGCLILAV-----LTTFKEY-ETVSGDWLLLLET 161

235 VCIAWFTMEYLLRFLSSP-----KKW----KFFKGPLNAIDLLAILPYYVTIFLTESNKS 285
      |  |  |+ ||  ++      | |    || + ||  +|+  ++   | +    +  +
162 FAIFIFGAEFALRIWAAGCCCRYKGWRGRLKFARKPLCMLDIFVLIA-SVPVVAVGNQGN 220

286 VLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIF 345
    ||        ++  | ++|||+|++ |     + ||  +     || +   ++    +| 
221 VLATS-----LRSLRFLQILRMLRMDRRGGTWKLLGSAICAHSKEL-ITAWYIGFLTLIL 274

346 SS-LVFFAEKD---------EDDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGG 395
    || ||+  |||         |   +|++   + ||  ||+ |+||||  |||  |+++  
275 SSFLVYLVEKDVPEVDAQGEEMKEEFETYADALWWGLITLATIGYGDKTPKTWEGRLIAA 334

396 LCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRRE 434
       + ||   |||  |+ +  +   +|| ||+   |||+
335 TFSLIGVSFFALPAGILGSGLALKVQEQHRQKHFEKRRK 373