Affine Alignment
 
Alignment between COL9A2 (top ENST00000372748.8 689aa) and COL9A3 (bottom ENST00000649368.1 684aa) score 33136

006 ASPRS------LLVLLQVVVLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDNGPPGKA 059
    | ||+      ||+| +++  | ||  | |   |||||||||| || |||||+ ||||  
002 AGPRACAPLLLLLLLGELLAAAGAQRVGLP---GPPGPPGPPGKPGQDGIDGEAGPPGLP 058

060 GPPGPKGEPGKAGPDGP---DGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPG 116
    ||||||| ||| |  |     | ||+|||||  | ||| | || +|  | |||||| | |
059 GPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKG 118

117 FAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGLEGSADFLCPT 176
      ||||  |  | || ||+||| |  |  |  ||||||| || || +   ||+ |  ||+
119 LPGPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLP--EGATDLQCPS 176

177 NCPPGMKGPPGLQGVKGHAGKRGILGDPGHQGKPGPKGDVGASGEQGIPGP---PGPQGI 233
     ||||  ||||+ | ||  | +   |+ |  || | ||| |  |  |+||     ||+|+
177 ICPPGPPGPPGMPGFKGPTGYK---GEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGL 233

234 RGYPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGRAGEKGDEGSPGIRGPQGI 293
    || ||  || |+ || |++|  |  || |  |+ | ||| |  | ||| | || +|  |+
234 RGLPGPLGPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGV 293

294 TGPKGATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGE 353
     || |  | || +|++| ||  | || ||+ | ||  |  || |+||+ |+||  |++| 
294 AGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGR 353

354 PGPQGLPGFSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGP 413
     |  |  | || ||  |+ |  || |  |  |  |  | +|| | || +| || ||  | 
354 AGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGD 413

414 PGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGE 473
    ||+|||||| |  ||+|  |  ||+|  |  |  ||||+||| | ||  ||||+ | |||
414 PGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGE 473

474 PGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGRQGVEGRDATDQHIVDVALKML 533
     |  |  |  |  |||| |||||| || |  ||||  |+ || |++|++| | ++   |+
474 LGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMI 533

534 QEQLAEVAVSAKRE-ALGAVGMMGPPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIG 592
     ||+|++|   ++  | |++|  || ||||||| ||     |||| || ||  |  |++|
534 SEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGS---IGHPGARGPPGYRGPTGELG 590

593 NTGPKGKRGEKGDPGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRP 652
    + ||+| +|++|| |  | |  |  |  |  |  | || + +|+||  | || ||+ | |
591 DPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLP 650

653 GLPGPVGLPGFCEPAACLGA 672
    |  |  | || |+ +|| ||
651 GAIGAQGTPGICDTSACQGA 670