Affine Alignment
 
Alignment between C1QC (top ENST00000374640.9 245aa) and C1QB (bottom ENST00000509305.6 251aa) score 11685

008 LPHLGLKLLLLLLLLPL--RGQANTGCYG---IPGMPGLPGAPGKDGYDGLPGPKGEPGI 062
    +|   + +|+||||| |    ||   | |   |||+||+|| || ||  | || ||| |+
003 IPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGL 062

063 PAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVF 122
    | + |  |  |+||+||+||+||| || || |  | ||  | ||  || | ||   +  |
063 PGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAF 122

123 TVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHTANLCVLL 182
    + ||  + |   +  |||+ |+||   +|+  +||||||||||||| ||||   |||| |
123 SATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNLCVNL 182

183 YRS---GVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQGSDSVFSG 239
     |      |||||| +   | || +||++|+|+ || |+|   |   ++|++|++|+|||
183 MRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSIFSG 242

240 FLLFPD 245
    ||||||
243 FLLFPD 248