Affine Alignment
 
Alignment between HLA-DRB5 (top ENST00000374975.4 266aa) and HLA-DOA (bottom ENST00000229829.7 250aa) score 3477

124 VEPKVTVYPARTQTLQHHNLLVCSVNGFYPGSIEVRWFRNSQEEKAGVVSTGLIQNGDWT 183
    | |+||| |     |   |+|+| |+  +|  | + | || |    ||  |      |  
111 VPPRVTVLPKSRVELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQTSFYSQPDHL 170

184 FQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRAQ----SESAQSKMLSGVG------ 233
    |+    |  || + +|| |||||  + +||   |  |       |   ++  +|      
171 FRKFHYLPFVPSAEDVYDCQVEHWGLDAPLLRHWELQVPIPPPDAMETLVCALGLAIGLV 230

234 GFVLGLLFLGAGLFI 248
    ||++| + +  | ++
231 GFLVGTVLIIMGTYV 245