Affine Alignment
 
Alignment between HLA-E (top ENST00000376630.5 358aa) and HLA-A (bottom ENST00000376809.10 365aa) score 28576

001 MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDND 060
    |   ||||||| |||||||||||||++|| ||||||||||||||+|||||||||||||+|
004 MAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSD 063

061 AASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH 120
    ||| || |||||+|||| ||||+|||+ +  +|  ||+| |||||||||||||||+| |+
064 AASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMY 123

121 GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAY 180
    ||++| |||||||| | |||||||+ |||||||||| | ||||+++|   | |||  |||
124 GCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAY 183

181 LEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQ 240
    |+ |||||| +||| |||||   +|||||+|||||||||||||||||||||||||||||+
184 LDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLTWQR 243

241 DGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPASQ 300
    |||  |||||||||||||||||||||||||||||||||||||||||||+|+||||+ +||
244 DGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSSQ 303

301 PTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSGGKGGSYSKAEWSDSAQGSE 354
    ||||||||||||||||+|++|||||||+||+|||  |||||++|  |||||||+
304 PTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSD 357