Affine Alignment
 
Alignment between HLA-E (top ENST00000376630.5 358aa) and HLA-B (bottom ENST00000412585.7 362aa) score 28158

001 MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDND 060
    |   |+||||| |||||+|||||||++||+||||||||||||||||||||||||||||+|
004 MAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD 063

061 AASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH 120
    |||||  |||||+|||| ||||| |+  +  ||  | +|| |||||||||||||||| |+
064 AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY 123

121 GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAY 180
    ||++||||| |||++|+|||||||+ |||||||||| ||||||+++|   | ||| +|||
124 GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAY 183

181 LEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQ 240
    ||  ||||| +||| ||+ |   +|||||||||||||||||||||||||||||||||||+
184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243

241 DGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPASQ 300
    |||  |||||||||||||| ||||||||||||||||||||||||||||+|+||||+|+||
244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303

301 PTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSGGKGGSYSKAEWSDSAQGSE 354
     |+|||||+||| +|  || |||||||+ |+|||||||||||+|  |||||||+
304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSD 357