Affine Alignment
 
Alignment between CDX2 (top ENST00000381020.8 313aa) and ISX (bottom ENST00000404699.7 245aa) score 2907

130 PSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKPAQQSLGSQVKTRTKDKY 189
    |+  | + +   ||  ||   ||    |  |        + || +     |   ++| + 
040 PARRSDMDRPEGPGEEGPGEAAA----SGSG--------LEKPPKDQ--PQEGRKSKRRV 085

190 RVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINK 246
    |  +|  |  |||| ||++ |  +  +++||| + | | +|+|||||+||| ||  |
086 RTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEK 142