Affine Alignment
 
Alignment between TRBV4-1 (top ENST00000390357.3 114aa) and TRBV30 (bottom ENST00000417977.2 111aa) score 2014

005 LLCCAVLCLLG---AVPIDTEVTQTPKHLVMGMTNKKSLKCE-QHMGHRAMYWYKQKAKK 060
    +||  +  |||    |   | + | |  ||  + +  ||+|  +   +  +|||+| | +
001 MLCSLLALLLGTFFGVRSQT-IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGR 059

061 PPELMFVYSYEKLSINESVPSRFSPECPNSSLLNLHLHALQPEDSALYLCASS 113
      +|+| ||     |+  ||   |   |      |    |   ||  |||| |
060 GLQLLF-YSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWS 111