Affine Alignment
 
Alignment between TRAV16 (top ENST00000390444.1 109aa) and TRAV10 (bottom ENST00000390432.2 114aa) score 2014

001 MKPTLISVLVI--IFILRGTRAQRVTQPEKLLSVFKGAPVELKCNYSYSGSPELFWYVQ- 057
    ||  | + |||  ++  ||    +| |  + | + +|    |+|||+ |    | || | 
001 MKKHLTTFLVILWLYFYRGNGKNQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQD 060

058 YSRQRLQLLLRHISR--ESIKGFTADLNKGETSFHLKKPFAQEEDSAMYYCALS 109
      |  + | +   |   +|   +|| |+       |    +|  ||| | | +|
061 TGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVS 114