Affine Alignment
 
Alignment between TRAV39 (top ENST00000390466.1 110aa) and TRAV25 (bottom ENST00000390454.2 109aa) score 3800

007 MILWLQLDRLSGELKVEQNPLFLSMQEGKNYTIYCNYSTTSDRLYWYRQDPGKSLESLFV 066
    ++||+|| +++|+ +| | | +  +|||+++| ||| |||   + ||+| ||     |  
008 LVLWMQLSQVNGQ-QVMQIPQYQHVQEGEDFTTYCNSSTTLSNIQWYKQRPGGHPVFLIQ 066

067 LLSNGAVKQEGRLMASLDTKARLSTLHITAAVHDLSATYFCA 108
    |+ +| ||++ ||        + |+|||||       |||||
067 LVKSGEVKKQKRLTFQFGEAKKNSSLHITATQTTDVGTYFCA 108