Alignment between TRAV39 (top ENST00000390466.1 110aa) and TRAV27 (bottom ENST00000390457.2 109aa) score 3990

003 KLLAMILWLQLDRLSGELKVEQNPLFLSMQEGKNYTIYCNYSTTSDRLYWYRQDPGKSLE 062
    |    |||+||  +| +| +||+| |||+|||+| |+||| |+    | ||||+||+   
004 KFSVSILWIQLAWVSTQL-LEQSPQFLSIQEGENLTVYCNSSSVFSSLQWYRQEPGEGPV 062

063 SLFVLLSNGAVKQEGRLMASLDTKARLSTLHITAAVHDLSATYFCA 108
     |  +++ | ||+  ||        + |+||||||    +  | ||
063 LLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQTGDTGLYLCA 108