Affine Alignment
 
Alignment between TRAV39 (top ENST00000390466.1 110aa) and TRAV36DV7 (bottom ENST00000390463.3 113aa) score 3686

005 LAMILWLQLDRLSGELKVEQNPLFLSMQEGKNYTIYCNYSTTSDR-LYWYRQDPGKSLES 063
    |  | || |  +| | || |+|| | + ||   |+ |+|  |+ | | ||+|+  |+   
008 LLAIFWLLLSWVSSEDKVVQSPLSLVVHEGDTVTLNCSYEVTNFRSLLWYKQEK-KAPTF 066

064 LFVLLSNGAVKQEGRLMASLDTKARLSTLHITAAVHDLSATYFCAVD 110
    ||+| |+|  |+ ||| + || |   | |+|||     || | |||+
067 LFMLTSSGIEKKSGRLSSILDKKELFSILNITATQTGDSAIYLCAVE 113