Affine Alignment
 
Alignment between TRAV39 (top ENST00000390466.1 110aa) and TRAV41 (bottom ENST00000390468.1 112aa) score 3895

001 MKKLLAMILWLQLDRLS-GELKVEQNPLFLSMQEGKNYTIYCNYSTTSDRLYWYRQDPGK 059
    +++ |  ||||||  +|  + +|||+|  |+ |||+  || |+||     |+| +| || 
004 IRQFLLAILWLQLSCVSAAKNEVEQSPQNLTAQEGEFITINCSYSVGISALHWLQQHPGG 063

060 SLESLFVLLSNGAVKQEGRLMASLDTKARLSTLHITAAVHDLSATYFCAV 109
     + ||| +||+|  |+ |||+|+++ + + |+|||||+    || | |||
064 GIVSLF-MLSSGK-KKHGRLIATINIQEKHSSLHITASHPRDSAVYICAV 111