Affine Alignment
 
Alignment between MAG (top ENST00000392213.8 626aa) and CNTN2 (bottom ENST00000331830.7 1040aa) score 3116

236 VKYPPVIVEMNSSVEAIEGSHVSLLCGADSNPPPLLTWMRDGTVLREAVAESLL---LEL 292
    |+  |  +++ |  ||  ||++   | |   | | + |+|+|  |       +|   |  
323 VQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLAGDLRF 382

293 EEVTPAEDGVYACLAENAYGQDNRTVGLSVM-YAP---WKPTVNGTMVAVEGETVSILCS 348
     +++  + |+| |+||| +|    +  |+|   ||     | |   + |  |  + | | 
383 SKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNP-VRRLIPAARGGEILIPCQ 441

349 TQSNPDPILTIFKEKQIL---STVIYESELQLELPAVSPEDDGEYWCVAENQYGQRATAF 405
     ++ |  ++   |  +||   | |    +  | +  +|  |+|+| | |||  |+  +  
442 PRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG 501

406 NLSVEFAPVLLLESHCAAAR--DTVQCLCVVKSNPEPSVAFELPSRNVTVNESEREFVYS 463
     |||  |  + |    |     | +   |    +|   + |     +  + + ++   + 
502 ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPI-DFDKPGGHY 560

464 ERSGL--VLTSILTLRGQAQAPPRVICTARNLYGAKSLELPFQGAHRLMWAKIGPVGAVV 521
     |+ +   +  +  |  | +   +  | |+ +  + | |     |  |+    || | ||
561 RRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKE-----ATVLVRGPPGPPGGVV 615