Alignment between HOXD13 (top ENST00000392539.4 343aa) and HOXD11 (bottom ENST00000249504.7 338aa) score 4731

017 GGAGGAPASSSSSSVAAAAASGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASGFAY 076
    || ||  |   ||        |   |+  || +|      ||||||||||||  |+    
077 GGGGGGSAGGGSSGGGPGGGGGGAGGY--APYYA------AAAAAAAAAAAAEEAA---- 124

077 PGTSERTGSSSSSSSSAVVAARPEAPPAKECP-----APTPAAAAAAPPSAPALGYGYHF 131
                         |   |||   |     || |  ||  ||  ||       
125 -------------------MQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPA-----GA 160

132 GNGYYSCRMSHGV---GLQQ--NALKSSPHASLGGFPVEKYMDVSGLASSSVPANEVPAR 186
     + +||    +|+   |  |   |    | |              |      ||   |  
161 ASNFYSAVGRNGILPQGFDQFYEAAPGPPFA--------------GPQPPPPPAPPQPEG 206

187 AKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVYCTK 246
    | +                          |+||  |              |      |||
207 AAD-------------------------KGDPRTGA--------------GGGGGSPCTK 227

247 DQP--------QGSHFWKSSFPGDVALNQPDMCVY-RRGRKKRVPYTKLQLKELENEYAI 297
      |        +||       ||+    +    |  +| |||| |||| |++||| |+  
228 ATPGSEPKGAAEGSGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFF 287

298 NKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKKI 334
    | +|||+|| ++|   ||++||| |||||||+|+||+
288 NVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKL 324