Alignment between HOXD13 (top ENST00000392539.4 343aa) and NKX3-2 (bottom ENST00000382438.6 333aa) score 2223

027 SSSSVAAAAASGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASGFAYPGTSERTGSS 086
    +| |+ |     + || |+||       | ||+ ||| |       |       ||   +
010 TSFSIQAILNKKEERGGLAAPEGRPAPGGTAASVAAAPAVCCWRLFG-------ERDAGA 062

087 SSSSSSAVVAARPEAPPAKECPAPTPAAAAAAPPSAPALGYGYHFGNGYYSCRMSHGVGL 146
       +  +++|    +|      |   | +     |  ||             | + | ||
063 LGGAEDSLLA----SPAGTRTAAGRTAESPEGWDSDSALSEENESRRRCADARGASGAGL 118

147 QQNALKSSPHASLGGFPVEKYMDVSGLASSSVPANEVPARA-KEVSFYQGYTSPYQHVPG 205
       +|      |||         |  ||+|     |   |+  |+|              
119 AGGSL------SLG-------QPVCELAASKDLEEEAAGRSDSEMS-------------- 151

206 YIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVYCTKDQPQGSHFWKSSFPGDVAL 265
         |  |   || |               | +    |+     |+     | |  || 
152 ----ASVSGDRSPRTE--------DDGVGPRGAHVSALCS-----GAGGGGGSGPAGVAE 194

266 NQPDMCVYR-RGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWF 324
     + +    + | ++ |  ++  |+ |||  +   ++++  +|  ++|+  |+| || |||
195 EEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWF 254

325 QNRRVKDKK 333
    |||| | |+
255 QNRRYKTKR 263