Affine Alignment
 
Alignment between GLI3 (top ENST00000395925.8 1580aa) and ZNF16 (bottom ENST00000394909.7 682aa) score 4959

467 KDESKQEPEVIYETNCHWEGCAREFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKP 526
    | +     |  || |     | + |     |+ |     ||  +| +||   +|    | 
310 KHQKSHMSEKPYECN----ECGKAFRRSSNLIQH---QRIHSGEKPYVCS--ECG---KA 357

527 FKAQYMLVVHMRRHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKA 586
    |+    |+ | | |||||| +|    | ||+|+  +|+ | | ||||||| |    | | 
358 FRRSSNLIKHHRTHTGEKPFEC--GECGKAFSQSAHLRKHQRVHTGEKPYEC--NDCGKP 413

587 FSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHV 638
    ||  |+  || +| |+ |||| |    | | ++  ||| +| +   | + ||
414 FSRVSNLIKH-HRVHTGEKPYKCS--DCGKAFSQSSSLIQHRRIHTGEKPHV 462