Affine Alignment
 
Alignment between HLA-B (top ENST00000412585.7 362aa) and HLA-E (bottom ENST00000376630.5 358aa) score 28158

004 MAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSD 063
    |   |+||||| |||||+|||||||++||+||||||||||||||||||||||||||||+|
001 MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDND 060

064 AASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMY 123
    |||||  |||||+|||| ||||| |+  +  ||  | +|| |||||||||||||||| |+
061 AASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH 120

124 GCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAY 183
    ||++||||| |||++|+|||||||+ |||||||||| ||||||+++|   | ||| +|||
121 GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAY 180

184 LEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQR 243
    ||  ||||| +||| ||+ |   +|||||||||||||||||||||||||||||||||||+
181 LEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQ 240

244 DGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPSSQ 303
    |||  |||||||||||||| ||||||||||||||||||||||||||||+|+||||+|+||
241 DGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPASQ 300

304 STVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSD 357
     |+|||||+||| +|  || |||||||+ |+|||||||||||+|  |||||||+
301 PTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSGGKGGSYSKAEWSDSAQGSE 354