Affine Alignment
 
Alignment between HLA-DMB (top ENST00000418107.3 263aa) and HLA-DPB1 (bottom ENST00000418931.7 258aa) score 3990

065 EFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQPFWGSLTNRTR-PPSVQVAKTT 123
    ||  +  |    +++ | +  +++  |        |     | +| + |  | | |+ + 
073 EFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSK 132

124 PFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHSSAHKTAQPNGDWTYQTLSHLALT 183
        +   +| |+|  |||  + + |  ||+       +    + |||||+| |  | +|
133 KGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIR-NGDWTFQILVMLEMT 191

184 PSYGDTYTCVVEHTGAPEPILRDWTPGLSPMQTLKVSVSAVTLGLGLIIFSLGVISWRRA 243
    |  || ||| ||||    |+  +|    |     |    |    |||||  +|+   ||+
192 PQQGDVYTCQVEHTSLDSPVTVEW-KAQSDSARSKTLTGAGGFVLGLIICGVGIFMHRRS 250