Affine Alignment
 
Alignment between C1QB (top ENST00000509305.6 251aa) and C1QA (bottom ENST00000374642.8 245aa) score 8208

001 MKIPWGSIPVLMLLLLLGLI---DISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIK 057
    |+ | | + + +| + |  +   |+ +|     |    ||  | ||  |  |+|| |||+
001 MEGPRGWLVLCVLAISLASMVTEDLCRAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR 060

058 GEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKAT 117
       |+ || || ||      ||  |||||||  || || |  | ||  | ||  |+ |  
061 --TGIQGLKGDQGE------PGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQ 112

118 QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGN 177
     + |||| |  | |+  +  | || ||||    |+  ||+| | ||| ||||+   |+  
113 PRPAFSAIRR-NPPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWE 170

178 LCVNLM-RGRERAQKVVTFCDYA-YNTFQVTTGGMVLKLEQGENVFLQATDKNSLL--GM 233
    +|++++   | + ++ + |||      ||| +|||||+|+||+ |+++   |   +  | 
171 ICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGS 230

234 EGANSIFSGFLLFP 247
    | |+|+|||||+||
231 E-ADSVFSGFLIFP 243