Affine Alignment
 
Alignment between TRAV30 (top ENST00000557168.1 112aa) and TRBV5-5 (bottom ENST00000632187.1 114aa) score 1919

010 GTLLWQLTWVRSQQPV-----QSPQAVILREGEDAVINCSSSKALYSVHWYRQKHGEAPV 064
    | | | |  +    ||     |||  +|   |+   + ||      || ||+|  |+ | 
004 GLLCWVLLCLLVAGPVDAGVTQSPTHLIKTRGQQVTLRCSPISGHKSVSWYQQVLGQGPQ 063

065 FLMILLKGGEQKGHDKISASFNEKK---QQSSLYLTASQLSYSGTYFCGT 111
    |+    +  |++|       |+ ++     | | + |  |  |  | | +
064 FIFQYYE-KEERGRGNFPDRFSARQFPNYSSELNVNALLLGDSALYLCAS 112