Affine Alignment
 
Alignment between TRBV9 (top ENST00000633328.1 114aa) and TRBV5-1 (bottom ENST00000390381.3 114aa) score 6992

001 MGFRLLCCVAFCLLGAGPVDSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQ 060
    || |||| |  |||||||| +||||||++||   ||+||| ||| ||  || ||||+  |
001 MGSRLLCWVLLCLLGAGPVKAGVTQTPRYLIKTRGQQVTLSCSPISGHRSVSWYQQTPGQ 060

061 GLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSV 114
    ||||| +|++  +| |||   ||| +|| +  ||+|+|+||||||||| ||||+
061 GLQFLFEYFSETQRNKGNFPGRFSGRQFSNSRSEMNVSTLELGDSALYLCASSL 114