Alignment between TRBV9 (top ENST00000633328.1 114aa) and TRBV3-1 (bottom ENST00000390387.3 114aa) score 5263

001 MGFRLLCCVAFCLLGAGPVDSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQ 060
    || |||||| |||| |||+|+ |+||||+|+|  |   +++|    |  ++|||+|   +
001 MGCRLLCCVVFCLLQAGPLDTAVSQTPKYLVTQMGNDKSIKCEQNLGHDTMYWYKQDSKK 060

061 GLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASS 113
     |+ +  | | |      +  ||| +     |  |+++||||||||+||||||
061 FLKIMFSYNNKELIINETVPNRFSPKSPDKAHLNLHINSLELGDSAVYFCASS 113