Affine Alignment
 
Alignment between TRBV11-1 (top ENST00000634176.1 115aa) and TRBV6-4 (bottom ENST00000633472.1 114aa) score 2565

001 MSTRLLCWMALCLLGAELSEAEVAQSPRYKITEKSQAVAFWCDPISGHATLYWYRQILGQ 060
    |  |||| +|  || |    | + |+|  +|    + +   |     |  +||||| || 
001 MRIRLLCCVAFSLLWAGPVIAGITQAPTSQILAAGRRMTLRCTQDMRHNAMYWYRQDLGL 060

061 GPELLVQFQDESVVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAMYLCASS 114
    |  |+            ++| | +|  |    |  | +  |    +++| ||||
061 GLRLIHYSNTAGTTGKGEVP-DGYSVSRANTDDFPLTLASAVPSQTSVYFCASS 113