Affine Alignment
 
Alignment between PITX2 (top ENST00000644743.1 324aa) and PITX3 (bottom ENST00000370002.8 302aa) score 14630

047 LDSSKHRLEVHTISDTSSPEAAEKDKSQQGK----NEDVGA-------EDPSKKKRQRRQ 095
    |  ++ |    ++||  +|     +   +|+    +|   |       || | ||+||||
006 LSEAEARSPALSLSDAGTPHPQLPEHGCKGQEHSDSEKASASLPGGSPEDGSLKKKQRRQ 065

096 RTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ 155
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||+||
066 RTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ 125

156 AELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPF-FNSMNVNPLSS 214
    |||||  |     ||+ ||+++|||||| ||  | | +  |+ |+||| |||+|| ||+|
126 AELCKGSFAAPLGGLVPPYEEVYPGYSYGNWPPKAL-APPLAAKTFPFAFNSVNVGPLAS 184

215 QSMFSPPNSI-SSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPY-- 271
    | +||||+|| +||  |++  |  | | ||+          |+  +++|     +|||  
185 QPVFSPPSSIAASMVPSAAAAPGTVPG-PGALQGLGGGPPGLAPAAVSSG--AVSCPYAS 241

272 ------APPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQN--PASNLSACQYAVDRP 323
          |  + |||||| |||||||||||||||+|| | +|    ||+||| |||||+||
242 AAAAAAAAASSPYVYRDPCNSSLASLRLKAKQHASFSYPAVHGPPPAANLSPCQYAVERP 301

324 V 324
    |
302 V 302