Affine Alignment
 
Alignment between FOXC1 (top ENST00000645831.2 553aa) and FOXS1 (bottom ENST00000375978.5 330aa) score 9652

065 GPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQN 124
    ||  |  +|    |||||||||| ||||++| ++ ||+|||++|| || ||| |+ ||||
008 GPGAPTTEP---TKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQN 064

125 SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKK-------K 177
    |||||||||||||||||||+||||||||||||| ++|||+|||||||||| +       +
065 SIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGAEGTR 124

178 DAVKDKEEKDRLHLKEPPPP----GRQ---PP--PAPPEQADGNAPGPQP---------- 218
       | +    |   ++|  |    |||   ||  | |   + |   |  |          
125 GPAKARRGPLRATSQDPGVPNATTGRQCSFPPELPDPKGLSFGGLVGAMPASMCPATTDG 184

219 ---PPVRIQDIKTENGTCPSP-PQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPP 274
       ||+  ++| |    ||   |   | ++    |  |   + || + + + + |  |  
185 RPRPPMEPKEISTPKPACPGELPVATSSSSCPAFGFPAGFSEAESFNKAPTPVLSPESGI 244

275 GSLPSARPLSLD---GAD--------SAPPPPAPSAPP 301
    ||    |  +|+   |||        || | |||  ||
245 GSSYQCRLQALNFCMGADPGLEHLLASAAPSPAPPTPP 282