Alignment between HOXA13 (top ENST00000649031.1 388aa) and HOXD11 (bottom ENST00000249504.7 338aa) score 4655

100 GAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAA 159
    |       | | ||  |||||||||||||  ||      | |||       |   |  ||
092 GPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLP-PAGRRPDVLFKAPEPVCAA 150

160 AQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAE 219
         |||    |   + |    | |  |                 |   |    ||   
151 PGPPHGPA----GAASNFYSAVGRNGILPQ---------------GFDQFYEAAPGPP-- 189

220 EFSSRAKEFAFYHQGYAAGPYHHHQPMP----GYLDM-PVVPGLGGPGESRHEPLGLPME 274
                     |||     | |    |  |      | || | |   |      
190 ----------------FAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGS---PCTKATP 230

275 SYQPWALPNGWNGQMYCPKEQAQPPHLWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQL 334
      +|     |  |    |  +|                 | | + +| |||| |||| |+
231 GSEPKGAAEGSGGDGEGPPGEAG------------AEKSSSAVAPQRSRKKRCPYTKYQI 278

335 KELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKV 380
    +|||||+  | +| |+|| ++|   ||++||| |||||||+||||+
279 RELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKL 324