UCSC Human Gene Sorter
 
genome assembly search
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Name
VisiGene
BLASTP
E-Value
Genome Position
Description
1UGT2B28n/a
n/a
n/a
n/a
0chr4 69,287,762UDP glucuronosyltransferase family 2 member B28, transcript variant 1 (from RefSeq NM_053039.2)
2MIR3972n/a
    
    
     
n/achr1 17,277,932microRNA 3972 (from RefSeq NR_039768.1)
3ATP6V0CP2n/a
    
    
     
n/achr3 111,478,840ATPase H+ transporting V0 subunit c pseudogene 2 (from HGNC ATP6V0CP2)
4MIR5091n/a
    
    
     
n/achr4 13,627,911microRNA 5091 (from RefSeq NR_049814.1)
5Y_RNAn/a
    
    
     
n/achr1 111,446,853Y_RNA (from geneSymbol)
6ENSG00000251858n/a
    
    
     
n/achr14 41,594,527ENSG00000251858 (from geneSymbol)
7C8orf44-SGK3n/a
n/a
n/a
n/a
n/achr8 66,764,044C8orf44-SGK3 readthrough (from RefSeq NM_001204173.2)
8RPS18P8n/a
    
    
     
n/achr6 4,979,283ribosomal protein S18 pseudogene 8 (from HGNC RPS18P8)
9ENSG00000251691n/a
    
    
     
n/achr4 69,306,821ENSG00000251691 (from geneSymbol)
10SNORA74Dn/a
    
    
     
n/achr5 139,276,250small nucleolar RNA, H/ACA box 74D (from RefSeq NR_145749.2)
11FMO8Pn/a
n/a
n/a
n/a
n/achr1 166,573,441flavin containing monooxygenase 8 pseudogene (from HGNC FMO8P)
12AKIRIN1P1n/a
    
    
     
n/achr12 80,561,288akirin 1 pseudogene 1 (from HGNC AKIRIN1P1)
13ENSG00000236231n/a
    
    
     
n/achr2 176,528,281ENSG00000236231 (from geneSymbol)
14ENSG00000282610n/a
n/a
n/a
n/a
n/achr7_KI270803v1_alt 511,206V region of the variable domain of T cell receptor (TR) beta  chain that participates in the antigen recognition (PubMed:24600447).  Alpha-beta T cell receptors are antigen specific receptors which are  essential to the immune response and are present on the cell surface of  T lymphocytes. Recognize peptide-major histocompatibility (MH) (pMH)  complexes that are displayed by antigen presenting cells (APC), a  prerequisite for efficient T cell adaptive immunity against pathogens  (PubMed:25493333). Binding of alpha-beta TR to pMH complex initiates  TR-CD3 clustering on the cell surface and intracellular activation of  LCK that phosphorylates the ITAM motifs of CD3G, CD3D, CD3E and CD247  enabling the recruitment of ZAP70. In turn ZAP70 phosphorylates LAT,  which recruits numerous signaling molecules to form the LAT  signalosome. The LAT signalosome propagates signal branching to three  major signaling pathways, the calcium, the mitogen-activated protein  kinase (MAPK) kinase and the nuclear factor NF-kappa-B (NF-kB)  pathways, leading to the mobilization of transcription factors that are  critical for gene expression and essential for T cell growth and  differentiation (PubMed:23524462). The T cell repertoire is generated  in the thymus, by V-(D)-J rearrangement. This repertoire is then shaped  by intrathymic selection events to generate a peripheral T cell pool of  self-MH restricted, non-autoaggressive T cells. Post-thymic interaction  of alpha-beta TR with the pMH complexes shapes TR structural and  functional avidity (PubMed:15040585). (from UniProt A0A0J9YX75)
15APOOP2n/a
    
    
     
n/achr3 87,595,107apolipoprotein O pseudogene 2 (from HGNC APOOP2)
16ENSG00000268209n/a
    
    
     
n/achr4 69,387,943ENSG00000268209 (from geneSymbol)
17RN7SL246Pn/a
n/a
n/a
n/a
n/achr12 45,874,182RNA, 7SL, cytoplasmic 246, pseudogene (from HGNC RN7SL246P)
18BRWD1P3n/a
    
    
     
n/achr7 17,033,283bromodomain and WD repeat domain containing 1 pseudogene 3 (from HGNC BRWD1P3)
19RN7SL865Pn/a
n/a
n/a
n/a
n/achr12 115,717,869RNA, 7SL, cytoplasmic 865, pseudogene (from HGNC RN7SL865P)
20ENSG00000261627n/a
    
    
     
n/achr18 6,642,224ENSG00000261627 (from geneSymbol)
21IGKV1OR-2n/a
n/a
n/a
n/a
n/achr9 64,765,294immunoglobulin kappa variable 1/OR-2 (pseudogene) (from HGNC IGKV1OR-2)
22Y_RNAn/a
    
    
     
n/achr12 32,705,454Y_RNA (from geneSymbol)
23RN7SL668Pn/a
n/a
n/a
n/a
n/achr1 234,904,337RNA, 7SL, cytoplasmic 668, pseudogene (from HGNC RN7SL668P)
24CYP4A26Pn/a
    
    
     
n/achr1 46,967,776cytochrome P450 family 4 subfamily A member 26, pseudogene (from HGNC CYP4A26P)
25RN7SL744Pn/a
n/a
n/a
n/a
n/achr12 54,344,743RNA, 7SL, cytoplasmic 744, pseudogene (from HGNC RN7SL744P)
26RNU6-1n/a
    
    
     
n/achr15 67,839,992RNA, U6 small nuclear 1 (from RefSeq NR_004394.1)
27MIR93n/a
    
    
     
n/achr7 100,093,807microRNA 93 (from RefSeq NR_029510.1)
28LINC02707n/a
    
    
     
n/achr11 34,572,429LINC02707 (from geneSymbol)
29SPINT4n/a
    
    
     
n/achr20 45,724,088serine peptidase inhibitor, Kunitz type 4 (from RefSeq NM_178455.3)
30ENSG00000258133n/a
    
    
     
n/achr12 58,394,867ENSG00000258133 (from geneSymbol)
31OR1L1n/a
    
    
     
n/achr9 122,662,182olfactory receptor family 1 subfamily L member 1 (from RefSeq NM_001005236.3)
32LINC01873n/a
    
    
     
n/achr2 66,387,878long intergenic non-protein coding RNA 1873 (from RefSeq NR_130931.1)
33ENSG00000259968n/a
n/a
n/a
n/a
n/achr5 73,953,477ENSG00000259968 (from geneSymbol)
34ATF1P1n/a
    
    
     
n/achr6 92,887,916activating transcription factor 1 pseudogene 1 (from HGNC ATF1P1)
35ENSG00000270542n/a
    
    
     
n/achr9 33,449,848ENSG00000270542 (from geneSymbol)
36ENSG00000271252n/a
    
    
     
n/achr1 95,751,283ENSG00000271252 (from geneSymbol)
37ENSG00000257726n/a
    
    
     
n/achr12 115,363,878ENSG00000257726 (from geneSymbol)
38ACTBP1n/a
    
    
     
n/achrX 46,288,572actin, beta pseudogene 1 (from HGNC ACTBP1)
39ENSG00000269189n/a
    
    
     
n/achr13 98,234,175ENSG00000269189 (from geneSymbol)
40ENSG00000223946n/a
    
    
     
n/achr6 42,030,717ENSG00000223946 (from geneSymbol)
41ENSG00000260600n/a
    
    
     
n/achr16 61,692,753ENSG00000260600 (from geneSymbol)
42TNPO1P2n/a
    
    
     
n/achr17 18,461,723transportin 1 pseudogene 2 (from HGNC TNPO1P2)
43TJAP1P1n/a
    
    
     
n/achrX 129,042,359TJAP1P1 (from geneSymbol)
44COX5BP3n/a
    
    
     
n/achr7 133,727,551cytochrome c oxidase subunit 5B pseudogene 3 (from HGNC COX5BP3)
45ENSG00000253266n/a
    
    
     
n/achr8 141,057,943ENSG00000253266 (from geneSymbol)
46HSPD1P9n/a
    
    
     
n/achr13 37,993,902heat shock protein family D (Hsp60) member 1 pseudogene 9 (from HGNC HSPD1P9)
47ENSG00000253657n/a
    
    
     
n/achr8 108,572,908ENSG00000253657 (from geneSymbol)
48ENSG00000268931n/a
    
    
     
n/achr19 8,425,591ENSG00000268931 (from geneSymbol)
49ENSG00000232337n/a
    
    
     
n/achr2 161,049,576ENSG00000232337 (from geneSymbol)
50RNU6-1278Pn/a
    
    
     
n/achr18 46,121,668RNA, U6 small nuclear 1278, pseudogene (from HGNC RNU6-1278P)