UCSC Human Gene Sorter
 
genome assembly search
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Name
VisiGene
BLASTP
E-Value
Genome Position
Description
1CYSLTR1n/a
n/a
n/a
n/a
1e-180chrX 78,299,539cysteinyl leukotriene receptor 1, transcript variant 3 (from RefSeq NM_006639.4)
2CD28n/a
n/a
n/a
n/a
n/achr2 203,722,775CD28 molecule, transcript variant 1 (from RefSeq NM_006139.4)
3CD200R1n/a
n/a
n/a
n/a
n/achr3 112,948,154CD200 receptor 1, transcript variant 1 (from RefSeq NM_138806.4)
4CYLD-AS1n/a
n/a
n/a
n/a
n/achr16 50,735,116CYLD antisense RNA 1, transcript variant 7 (from RefSeq NR_184279.1)
5ENSG00000267074n/a
    
    
     
n/achr17 35,504,980ENSG00000267074 (from geneSymbol)
6ENSG00000267554n/a
    
    
     
n/achr17 35,470,348ENSG00000267554 (from geneSymbol)
7LINC02978n/a
    
    
     
n/achr17 30,965,217LINC02978 (from geneSymbol)
8LAIR1n/a
n/a
n/a
n/a
n/achr19 54,358,157leukocyte associated immunoglobulin like receptor 1, transcript variant h (from RefSeq NR_110279.3)
9GYPEn/a
n/a
n/a
n/a
n/achr4 143,888,211glycophorin E (MNS blood group), transcript variant 2 (from RefSeq NM_198682.3)
10TRGV3n/a
    
    
     
n/achr7 38,358,837V region of the variable domain of T cell receptor (TR) gamma  chain that participates in the antigen recognition (PubMed:24600447).  Gamma-delta TRs recognize a variety of self and foreign non-peptide  antigens frequently expressed at the epithelial boundaries between the  host and external environment, including endogenous lipids presented by  MH-like protein CD1D and phosphoantigens presented by butyrophilin-like  molecule BTN3A1. Upon antigen recognition induces rapid, innate-like  immune responses involved in pathogen clearance and tissue repair  (PubMed:23348415, PubMed:28920588). Binding of gamma-delta TR complex  to antigen triggers phosphorylation of immunoreceptor tyrosine-based  activation motifs (ITAMs) in the CD3 chains by the LCK and FYN kinases,  allowing the recruitment, phosphorylation, and activation of ZAP70 that  facilitates phosphorylation of the scaffolding proteins LCP2 and LAT.  This lead to the formation of a supramolecular signalosome that  recruits the phospholipase PLCG1, resulting in calcium mobilization and  ERK activation, ultimately leading to T cell expansion and  differentiation into effector cells (PubMed:25674089). Gamma-delta TRs  are produced through somatic rearrangement of a limited repertoire of  variable (V), diversity (D), and joining (J) genes. The potential  diversity of gamma-delta TRs is conferred by the unique ability to  rearrange (D) genes in tandem and to utilize all three reading frames.  The combinatorial diversity is considerably increased by the sequence  exonuclease trimming and random nucleotide (N) region additions which  occur during the V-(D)-J rearrangements (PubMed:24387714). (from UniProt P03979)
11RN7SL138Pn/a
n/a
n/a
n/a
n/achr17 30,959,707RNA, 7SL, cytoplasmic 138, pseudogene (from HGNC RN7SL138P)
12ENSG00000255421n/a
    
    
     
n/achr11 76,137,523ENSG00000255421 (from geneSymbol)
13RPL32P1n/a
    
    
     
n/achr6 33,079,655ribosomal protein L32 pseudogene 1 (from HGNC RPL32P1)
14XCL1n/a
    
    
     
n/achr1 168,579,337X-C motif chemokine ligand 1 (from RefSeq NM_002995.3)
15RNU5B-2Pn/a
    
    
     
n/achr3 40,498,947RNA, U5B small nuclear 2, pseudogene (from HGNC RNU5B-2P)
16ENSG00000286030n/a
n/a
n/a
n/a
n/achr17 35,522,624ENSG00000286030 (from geneSymbol)
17ENSG00000237604n/a
    
    
     
n/achr21 44,175,971ENSG00000237604 (from geneSymbol)
18BET1P1n/a
n/a
n/a
n/a
n/achr7 150,749,915Bet1 golgi vesicular membrane trafficking protein pseudogene 1 (from HGNC BET1P1)
19CD101-AS1n/a
    
    
     
n/achr1 117,042,486CD101 antisense RNA 1 (from RefSeq NR_110786.1)
20UNC93B5n/a
    
    
     
n/achr11 67,713,853unc-93 homolog B5, pseudogene (from HGNC UNC93B5)
21ENSG00000271554n/a
    
    
     
n/achr1 36,002,813ENSG00000271554 (from geneSymbol)
22LINC03058n/a
    
    
     
n/achr14 20,784,090LINC03058 (from geneSymbol)
23CD160n/a
n/a
n/a
n/a
n/achr1 145,729,393CD160 molecule, transcript variant 1 (from RefSeq NM_007053.4)
24KLF7-IT1n/a
    
    
     
n/achr2 207,121,464KLF7 intronic transcript 1 (from HGNC KLF7-IT1)
25TSPAN3n/a
n/a
n/a
n/a
n/achr15 77,056,256tetraspanin 3, transcript variant 1 (from RefSeq NM_005724.6)
26EGLN2n/a
n/a
n/a
n/a
n/achr19 40,803,812egl-9 family hypoxia inducible factor 2, transcript variant 3 (from RefSeq NM_080732.4)
27SNORD45An/a
n/a
n/a
n/a
n/achr1 75,787,930small nucleolar RNA, C/D box 45A (from RefSeq NR_002749.1)
28VWFP1n/a
    
    
     
n/achr22 16,697,290von Willebrand factor pseudogene 1 (from HGNC VWFP1)
29ENSG00000273244n/a
    
    
     
n/achr22 16,685,332ENSG00000273244 (from geneSymbol)
30TRPC6P10n/a
    
    
     
n/achr7 30,544,242TRPC6P10 (from geneSymbol)
31ENSG00000232347n/a
    
    
     
n/achr1 247,226,257ENSG00000232347 (from geneSymbol)
32SEC62-AS1n/a
    
    
     
n/achr3 169,982,125SEC62 antisense RNA 1 (from HGNC SEC62-AS1)
33TMPPEn/a
n/a
n/a
n/a
n/achr3 33,093,784transmembrane protein with metallophosphoesterase domain, transcript variant 1 (from RefSeq NM_001039770.3)
34ENSG00000224950n/a
n/a
n/a
n/a
n/achr1 116,496,114ENSG00000224950 (from geneSymbol)
35ARPC1AP4n/a
    
    
     
n/achr4 86,914,041ARPC1AP4 (from geneSymbol)
36GABRR2n/a
n/a
n/a
n/a
n/achr6 89,284,881gamma-aminobutyric acid type A receptor subunit rho2 (from RefSeq NM_002043.5)
37ENSG00000273464n/a
    
    
     
n/achr21 29,657,618ENSG00000273464 (from geneSymbol)
38ENSG00000260022n/a
    
    
     
n/achr16 884,435ENSG00000260022 (from geneSymbol)
39H3P14n/a
    
    
     
n/achr4 112,565,193H3P14 (from geneSymbol)
40ENSG00000217078n/a
    
    
     
n/achr6 16,163,569ENSG00000217078 (from geneSymbol)
41RPL12P12n/a
n/a
n/a
n/a
n/achr20 19,823,693ribosomal protein L12 pseudogene 12 (from HGNC RPL12P12)
42TIGITn/a
n/a
n/a
n/a
n/achr3 114,302,158T cell immunoreceptor with Ig and ITIM domains (from RefSeq NM_173799.4)
43ATP7An/a
n/a
n/a
n/a
n/achrX 77,980,544ATPase copper transporting alpha, transcript variant 1 (from RefSeq NM_000052.7)
44C4orf46P2n/a
    
    
     
n/achrX 77,962,721C4orf46P2 (from geneSymbol)
45MIR92A1n/a
n/a
n/a
n/a
n/achr13 91,351,352microRNA 92a-1 (from RefSeq NR_029508.1)
46MIR20An/a
n/a
n/a
n/a
n/achr13 91,351,100microRNA 20a (from RefSeq NR_029492.1)
47MIR18An/a
n/a
n/a
n/a
n/achr13 91,350,786microRNA 18a (from RefSeq NR_029488.1)
48MIR19An/a
n/a
n/a
n/a
n/achr13 91,350,931microRNA 19a (from RefSeq NR_029489.1)
49MIR19B1n/a
n/a
n/a
n/a
n/achr13 91,351,235microRNA 19b-1 (from RefSeq NR_029490.1)
50MIR17n/a
n/a
n/a
n/a
n/achr13 91,350,646microRNA 17 (from RefSeq NR_029487.1)