UCSC Human Gene Sorter
 
genome assembly search
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#
Name
VisiGene
BLASTP
E-Value
Genome Position
Description
1MIR143n/a
n/a
n/a
n/a
n/achr5 149,428,970microRNA 143 (from RefSeq NR_029684.1)
2ARHGAP44-AS1n/a
    
    
     
n/achr17 12,775,191ARHGAP44 and MYOCD antisense RNA 1 (from RefSeq NR_104607.1)
3ENSG00000245869n/a
    
    
     
n/achr11 118,886,791ENSG00000245869 (from geneSymbol)
4KCNMA1-AS1n/a
n/a
n/a
n/a
n/achr10 76,941,221KCNMA1 antisense RNA 1 (from HGNC KCNMA1-AS1)
5GPR20n/a
    
    
     
n/achr8 141,361,878G protein-coupled receptor 20 (from RefSeq NM_005293.3)
6LINC00578n/a
n/a
n/a
n/a
n/achr3 177,604,653long intergenic non-protein coding RNA 578 (from HGNC LINC00578)
7RPL38P5n/a
    
    
     
n/achr2 201,162,582RPL38P5 (from geneSymbol)
8LDLRAD2n/a
n/a
n/a
n/a
n/achr1 21,818,745low density lipoprotein receptor class A domain containing 2 (from RefSeq NM_001013693.3)
9COL4A2-AS2n/a
    
    
     
n/achr13 110,459,841COL4A2 antisense RNA 2 (from RefSeq NR_171022.1)
10NRP2-AS1n/a
n/a
n/a
n/a
n/achr2 205,761,751NRP2-AS1 (from geneSymbol)
11SYNM-AS1n/a
    
    
     
n/achr15 99,029,986SYNM-AS1 (from geneSymbol)
12RHOG2Pn/a
    
    
     
n/achrX 71,352,703RHOG2P (from geneSymbol)
13Y_RNAn/a
    
    
     
n/achrX 108,677,004Y_RNA (from geneSymbol)
14ENSG00000229019n/a
    
    
     
n/achr9 68,428,106ENSG00000229019 (from geneSymbol)
15STON1-GTF2A1Ln/a
n/a
n/a
n/a
n/achr2 48,604,764Cytoplasm  Nucleus (from UniProt Q53S48)
16ENSG00000250734n/a
    
    
     
n/achr1 151,612,700ENSG00000250734 (from geneSymbol)
17HOXB-AS2n/a
    
    
     
n/achr17 48,558,797HOXB cluster antisense RNA 2 (from HGNC HOXB-AS2)
18RPL17P21n/a
    
    
     
n/achr5 52,904,193ribosomal protein L17 pseudogene 21 (from HGNC RPL17P21)
19Y_RNAn/a
    
    
     
n/achr6 31,402,201Y_RNA (from geneSymbol)
20ENSG00000253123n/a
n/a
n/a
n/a
n/achr8 37,329,298ENSG00000253123 (from geneSymbol)
21ENSG00000260859n/a
    
    
     
n/achr16 84,828,752ENSG00000260859 (from geneSymbol)
22PGM5P2n/a
n/a
n/a
n/a
n/achr9 41,057,029phosphoglucomutase 5 pseudogene 2 (from HGNC PGM5P2)
23ENSG00000253105n/a
n/a
n/a
n/a
n/achr8 96,379,119uncharacterized LOC102724804, transcript variant 1 (from RefSeq NR_125828.1)
24LINC01160n/a
n/a
n/a
n/a
n/achr1 111,603,986long intergenic non-protein coding RNA 1160 (from RefSeq NR_034126.1)
25FOXP2n/a
n/a
n/a
n/a
n/achr7 114,554,290forkhead box P2, transcript variant 8 (from RefSeq NR_033767.2)
26ENSG00000255410n/a
    
    
     
n/achr11 6,644,450ENSG00000255410 (from geneSymbol)
27SVIL2Pn/a
n/a
n/a
n/a
n/achr10 30,686,458SVIL2P (from geneSymbol)
28QRFPn/a
n/a
n/a
n/a
n/achr9 130,894,759pyroglutamylated RFamide peptide (from RefSeq NM_198180.3)
29ENSG00000271075n/a
    
    
     
n/achr14 52,871,837ENSG00000271075 (from geneSymbol)
30ENSG00000237061n/a
    
    
     
n/achr8 73,084,833ENSG00000237061 (from geneSymbol)
31ENSG00000235996n/a
    
    
     
n/achr20 19,213,164ENSG00000235996 (from geneSymbol)
32RTL3n/a
    
    
     
n/achrX 78,657,698retrotransposon Gag like 3 (from RefSeq NM_152694.3)
33RERG-IT1n/a
    
    
     
n/achr12 15,113,530RERG intronic transcript 1 (from RefSeq NR_046560.1)
34HIKESHIP1n/a
    
    
     
n/achrX 23,351,231HIKESHIP1 (from geneSymbol)
35ACTN1-DTn/a
n/a
n/a
n/a
n/achr14 68,983,572ACTN1 divergent transcript (from RefSeq NR_073422.1)
36PGM5P4n/a
n/a
n/a
n/a
n/achr2 113,552,617phosphoglucomutase 5 pseudogene 4 (from HGNC PGM5P4)
37ENSG00000255191n/a
    
    
     
n/achr11 70,000,845ENSG00000255191 (from geneSymbol)
38ENSG00000255741n/a
    
    
     
n/achr11 68,942,177ENSG00000255741 (from geneSymbol)
39LINC02613n/a
n/a
n/a
n/a
n/achr2 38,461,186LINC02613 (from geneSymbol)
40ENSG00000267304n/a
    
    
     
n/achr19 3,673,438ENSG00000267304 (from geneSymbol)
41TRAV39n/a
    
    
     
n/achr14 22,304,303V region of the variable domain of T cell receptor (TR) alpha  chain that participates in the antigen recognition (PubMed:24600447).  Alpha-beta T cell receptors are antigen specific receptors which are  essential to the immune response and are present on the cell surface of  T lymphocytes. Recognize peptide-major histocompatibility (MH) (pMH)  complexes that are displayed by antigen presenting cells (APC), a  prerequisite for efficient T cell adaptive immunity against pathogens  (PubMed:25493333). Binding of alpha-beta TR to pMH complex initiates  TR-CD3 clustering on the cell surface and intracellular activation of  LCK that phosphorylates the ITAM motifs of CD3G, CD3D, CD3E and CD247  enabling the recruitment of ZAP70. In turn ZAP70 phosphorylates LAT,  which recruits numerous signaling molecules to form the LAT  signalosome. The LAT signalosome propagates signal branching to three  major signaling pathways, the calcium, the mitogen-activated protein  kinase (MAPK) kinase and the nuclear factor NF-kappa-B (NF-kB)  pathways, leading to the mobilization of transcription factors that are  critical for gene expression and essential for T cell growth and  differentiation (PubMed:23524462). The T cell repertoire is generated  in the thymus, by V-(D)-J rearrangement. This repertoire is then shaped  by intrathymic selection events to generate a peripheral T cell pool of  self-MH restricted, non-autoaggressive T cells. Post-thymic interaction  of alpha-beta TR with the pMH complexes shapes TR structural and  functional avidity (PubMed:15040585). (from UniProt A0A0B4J263)
42COL6A2-DTn/a
    
    
     
n/achr21 46,095,397COL6A2-DT (from geneSymbol)
43MIR3074n/a
n/a
n/a
n/a
n/achr9 95,086,054microRNA 3074 (from RefSeq NR_036109.1)
44MKX-AS1n/a
    
    
     
n/achr10 27,764,691MKX antisense RNA 1 (from HGNC MKX-AS1)
45MIR4257n/a
    
    
     
n/achr1 150,551,971microRNA 4257 (from RefSeq NR_036211.1)
46SIGLEC6n/a
n/a
n/a
n/a
n/achr19 51,524,744sialic acid binding Ig like lectin 6, transcript variant 1 (from RefSeq NM_001245.7)
47ENSG00000236710n/a
    
    
     
n/achr11 3,084,918ENSG00000236710 (from geneSymbol)
48LINC00163n/a
    
    
     
n/achr21 44,991,975long intergenic non-protein coding RNA 163 (from RefSeq NR_033840.1)
49DIP2C-AS1n/a
n/a
n/a
n/a
n/achr10 659,829DIP2C antisense RNA 1, transcript variant 2 (from RefSeq NR_187391.1)
50CERS3-AS1n/a
    
    
     
n/achr15 100,418,894CERS3 antisense RNA 1 (from RefSeq NR_120374.1)