UCSC Human Gene Sorter
 
genome assembly search
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#
Name
VisiGene
BLASTP
E-Value
Genome Position
Description                                       
1LEFTY2n/a
n/a
n/a
n/a
n/achr1 225,938,911left-right determination factor 2, transcript variant 1 (from RefSeq NM_003240.5)
2ENSG00000248322n/a
    
    
     
n/achr1 225,936,984ENSG00000248322 (from geneSymbol)
3ENSG00000273908n/a
n/a
n/a
n/a
n/achr11 32,439,862ENSG00000273908 (from geneSymbol)
4ENSG00000276530n/a
n/a
n/a
n/a
n/achr11 32,439,146ENSG00000276530 (from geneSymbol)
5ENSG00000277119n/a
n/a
n/a
n/a
n/achr11 32,440,246ENSG00000277119 (from geneSymbol)
6ENSG00000278045n/a
n/a
n/a
n/a
n/achr11 32,436,913ENSG00000278045 (from geneSymbol)
7ENSG00000278822n/a
n/a
n/a
n/a
n/achr11 32,435,792ENSG00000278822 (from geneSymbol)
8RN7SL674Pn/a
n/a
n/a
n/a
n/achr2 11,584,910RNA, 7SL, cytoplasmic 674, pseudogene (from HGNC RN7SL674P)
9MTMR12P1n/a
n/a
n/a
n/a
n/achr11 101,209,177MTMR12P1 (from geneSymbol)
10ENSG00000253105n/a
n/a
n/a
n/a
n/achr8 96,379,119uncharacterized LOC102724804, transcript variant 1 (from RefSeq NR_125828.1)
11ENSG00000225028n/a
    
    
     
n/achr1 47,819,151ENSG00000225028 (from geneSymbol)
12LINC01391n/a
    
    
     
n/achr3 138,939,604long intergenic non-protein coding RNA 1391 (from RefSeq NR_121649.1)
13ENSG00000257207n/a
n/a
n/a
n/a
n/achr2 110,438,004ENSG00000257207 (from geneSymbol)
14LINC00683n/a
n/a
n/a
n/a
n/achr18 76,583,891long intergenic non-protein coding RNA 683 (from HGNC LINC00683)
15SETP2n/a
    
    
     
n/achr14 51,436,500SET pseudogene 2 (from HGNC SETP2)
16SSXP10n/a
    
    
     
n/achr6 118,589,352SSX family pseudogene 10 (from HGNC SSXP10)
17ENSG00000271547n/a
    
    
     
n/achr12 48,800,831ENSG00000271547 (from geneSymbol)
18ENSG00000271930n/a
    
    
     
n/achr8 98,943,846ENSG00000271930 (from geneSymbol)
19ENSG00000279353n/a
n/a
n/a
n/a
n/achr11 74,698,944ENSG00000279353 (from geneSymbol)
20MMP23An/a
n/a
n/a
n/a
n/achr1 1,700,862matrix metallopeptidase 23A (pseudogene) (from RefSeq NR_002946.1)
21ITGA11n/a
n/a
n/a
n/a
n/achr15 68,364,347integrin subunit alpha 11 (from RefSeq NM_001004439.2)
22ALDH1A2-AS1n/a
    
    
     
n/achr15 58,068,134ALDH1A2 antisense RNA 1 (from RefSeq NR_147215.1)
23BRCC3P1n/a
    
    
     
n/achr5 176,308,538BRCA1/BRCA2-containing complex subunit 3 pseudogene 1 (from HGNC BRCC3P1)
24RHOG2Pn/a
    
    
     
n/achrX 71,352,703RHOG2P (from geneSymbol)
25ENSG00000224413n/a
    
    
     
n/achr21 46,038,429ENSG00000224413 (from geneSymbol)
26ENSG00000257894n/a
n/a
n/a
n/a
n/achr12 79,448,517ENSG00000257894 (from geneSymbol)
27DUSP5P1n/a
n/a
n/a
n/a
n/achr1 228,650,810dual specificity phosphatase 5 pseudogene 1 (from HGNC DUSP5P1)
28RNA5SP18n/a
    
    
     
n/achr1 228,647,972RNA, 5S ribosomal pseudogene 18 (from HGNC RNA5SP18)
29ENSG00000206249n/a
    
    
     
n/achr20 38,307,433ENSG00000206249 (from geneSymbol)
30ENSG00000269289n/a
n/a
n/a
n/a
n/achr19 23,938,505ENSG00000269289 (from geneSymbol)
31RNU1-36Pn/a
    
    
     
n/achr4 88,000,319RNA, U1 small nuclear 36, pseudogene (from HGNC RNU1-36P)
32ENSG00000238906n/a
    
    
     
n/achr7 29,912,580ENSG00000238906 (from geneSymbol)
33ENSG00000260510n/a
    
    
     
n/achr16 20,755,141ENSG00000260510 (from geneSymbol)
34COL5A1-AS1n/a
    
    
     
n/achr9 134,651,229COL5A1 antisense RNA 1 (from RefSeq NR_138049.1)
35HMGB3P7n/a
    
    
     
n/achr13 101,802,183high mobility group box 3 pseudogene 7 (from HGNC HMGB3P7)
36RN7SL749Pn/a
n/a
n/a
n/a
n/achr10 119,213,001RNA, 7SL, cytoplasmic 749, pseudogene (from HGNC RN7SL749P)
37UBE2Q2P11n/a
    
    
     
n/achr15 84,417,305ubiquitin conjugating enzyme E2 Q2 pseudogene 11 (from HGNC UBE2Q2P11)
38ENSG00000258983n/a
n/a
n/a
n/a
n/achr14 88,507,418ENSG00000258983 (from geneSymbol)
39TRAV39n/a
    
    
     
n/achr14 22,304,303V region of the variable domain of T cell receptor (TR) alpha  chain that participates in the antigen recognition (PubMed:24600447).  Alpha-beta T cell receptors are antigen specific receptors which are  essential to the immune response and are present on the cell surface of  T lymphocytes. Recognize peptide-major histocompatibility (MH) (pMH)  complexes that are displayed by antigen presenting cells (APC), a  prerequisite for efficient T cell adaptive immunity against pathogens  (PubMed:25493333). Binding of alpha-beta TR to pMH complex initiates  TR-CD3 clustering on the cell surface and intracellular activation of  LCK that phosphorylates the ITAM motifs of CD3G, CD3D, CD3E and CD247  enabling the recruitment of ZAP70. In turn ZAP70 phosphorylates LAT,  which recruits numerous signaling molecules to form the LAT  signalosome. The LAT signalosome propagates signal branching to three  major signaling pathways, the calcium, the mitogen-activated protein  kinase (MAPK) kinase and the nuclear factor NF-kappa-B (NF-kB)  pathways, leading to the mobilization of transcription factors that are  critical for gene expression and essential for T cell growth and  differentiation (PubMed:23524462). The T cell repertoire is generated  in the thymus, by V-(D)-J rearrangement. This repertoire is then shaped  by intrathymic selection events to generate a peripheral T cell pool of  self-MH restricted, non-autoaggressive T cells. Post-thymic interaction  of alpha-beta TR with the pMH complexes shapes TR structural and  functional avidity (PubMed:15040585). (from UniProt A0A0B4J263)
40MIR646HGn/a
n/a
n/a
n/a
n/achr20 60,396,125MIR646 host gene (from HGNC MIR646HG)
41ENSG00000235996n/a
    
    
     
n/achr20 19,213,164ENSG00000235996 (from geneSymbol)
42ENSG00000270497n/a
    
    
     
n/achrX 53,065,300ENSG00000270497 (from geneSymbol)
43CSPG4P13n/a
n/a
n/a
n/a
n/achr15 77,899,679chondroitin sulfate proteoglycan 4 pseudogene 13 (from HGNC CSPG4P13)
44ENSG00000290664n/a
n/a
n/a
n/a
n/achr15 77,903,011ENSG00000290664 (from geneSymbol)
45ENSG00000259397n/a
n/a
n/a
n/a
n/achr15 35,092,845ENSG00000259397 (from geneSymbol)
46LINC01752n/a
n/a
n/a
n/a
n/achr20 10,791,409long intergenic non-protein coding RNA 1752 (from HGNC LINC01752)
47ENSG00000270792n/a
n/a
n/a
n/a
n/achr20 10,832,285ENSG00000270792 (from geneSymbol)
48GNAQP1n/a
    
    
     
n/achr2 131,424,334G protein subunit alpha q pseudogene 1 (from HGNC GNAQP1)
49ENSG00000226622n/a
n/a
n/a
n/a
n/achr2 62,598,167ENSG00000226622 (from geneSymbol)
50ENSG00000215304n/a
n/a
n/a
n/a
n/achr15 32,417,094ENSG00000215304 (from geneSymbol)