UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C34D1.2	C34D1.2	4.0000000000000004e-66	chrV 13,236,368	contains similarity to Pfam domain PF00751 DM DNA binding domain contains similarity to Interpro domain IPR001275 (DM DNA-binding)
2	F25E2.1	F25E2.1	n/a	chrX 803,494	contains similarity to Interpro domain IPR000276 (GPCR, rhodopsin-like)
3	ZC239.13	ZC239.13	n/a	chrII 3,222,611	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
4	F46F5.15	F46F5.15	n/a	chrII 788,813
5	ins-3	ZK75.3	n/a	chrII 5,990,388	ins-3 encodes one of several insulin-related peptides; INS-3 is classified as a Type-beta insulin based on the predicted arrangement of disulfide bonds; gfp gene fusions with the promoter and enhancer regions indicate that INS-3 is expressed in some amphid sensory neurons.
6	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
7	srw-10	ZC482.6	n/a	chrIII 12,755,860	C. elegans SRW-10 protein ;
8	str-2	C50C10.7	n/a	chrV 9,823,406	C. elegans STR-2 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	C27A12.4	C27A12.4	n/a	chrI 6,037,041
10	T23B3.1	T23B3.1	n/a	chrI 6,718,630
11	grk-2	W02B3.2	n/a	chrIII 678,078	grk-2 encodes a serine/threonine protein kinase that is most closely related to G protein-coupled receptor (GPCR) kinases; in C. elegans, grk-2 activity is required in chemosensory neurons for normal calcium influx during chemosensation, but is not required for GPCR downregulation; in regulating chemosensation, GRK-2 likely acts upstream of the ODR-3/G alpha protein, as overexpression of ODR-3 can rescue abnormal avoidance behavior in grk-2 mutants; GRK-2 is broadly expressed in the adult nervous system, with expression beginning as early as the 20-30-cell stage of embryonic development and continuing into adulthood.
12	F45F2.1	F45F2.1	n/a	chrV 8,538,519	contains similarity to Pfam domain PF03189 Protein of unknown function, DUF270 contains similarity to Interpro domain IPR004878 (Protein of unknown function DUF270)
13	R04E5.7	R04E5.7	n/a	chrX 8,797,318
14	fbxb-114	C30E1.5	n/a	chrX 16,922,274	C. elegans FBXB-114 protein; contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
15	gst-11	R11G1.3	n/a	chrX 3,633,139	C. elegans GST-11 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR003080 (Glutathione S-transferase, alpha class), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)
16	Y5F2A.3	Y5F2A.3	n/a	chrIV 11,069,794	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domain IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
17	str-92	F59A1.3	n/a	chrV 17,675,766	C. elegans STR-92 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
18	srz-6	T21B4.1	n/a	chrII 12,492,894	C. elegans SRZ-6 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
19	F46B3.8	F46B3.8	n/a	chrV 20,618,293	contains similarity to Pfam domain PF03380 Caenorhabditis protein of unknown function, DUF282 contains similarity to Interpro domain IPR005044 (Protein of unknown function DUF282, Caenorhabditis species)
20	K09C4.7	K09C4.7	n/a	chrX 3,272,932
21	Y54G9A.1	Y54G9A.1	n/a	chrII 13,700,041	contains similarity to Carabus linnei NADH dehydrogenase subunit 5 (Fragment).; TR:O79584
22	C03D6.1	C03D6.1	n/a	chrI 9,669,662	contains similarity to Canine parvovirus Coat protein VP1 [Contains: Coat protein VP2].; SW:COAT_PAVC7
23	B0207.10	B0207.10	n/a	chrI 5,959,278
24	clec-113	F47G4.1	n/a	chrI 14,055,730	C. elegans CLEC-113 protein; contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
25	nhr-182	F41B5.9	n/a	chrV 2,258,611	C. elegans NHR-182 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
26	tag-120	F40F9.2	n/a	chrV 9,708,653	tag-120 encodes a predicted transmembrane protein; as loss of tag-120 activity via RNAi does not result in any abnormalities, the precise role of TAG-120 in C. elegans development and/or behavior is not yet known; however, TAG-120 is homologous to a Drosophila NMDA receptor-associated protein and mammalian transmembrane proteins that function in Fas-mediated cell death, so TAG-120 may play a role in neuronal functions and/or apoptosis; a tag-120 reporter fusion is expressed in the nervous system, pharyngeal muscles, and to a lesser extent in the excretory system.
27	C12D8.9	C12D8.9	n/a	chrV 10,242,987	contains similarity to Oceanobacillus iheyensis Hypothetical protein.; TR:Q8ELE1
28	pqn-92	Y75B8A.27	n/a	chrIII 12,309,726	The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
29	C07E3.5	C07E3.5	n/a	chrII 10,364,567	contains similarity to Pfam domain PF04942 CC domain contains similarity to Interpro domain IPR007026 (Domian of unknown function, DUF-CC)
30	C41G6.12	C41G6.12	n/a	chrV 15,207,410	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
31	Y116A8C.1	Y116A8C.1	n/a	chrIV 16,901,344	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
32	C56G7.2	C56G7.2	n/a	chrIII 3,387,880	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
33	F16H6.7	F16H6.7	n/a	chrV 18,208,098	contains similarity to Pfam domain PF06162 Caenorhabditis elegans protein of unknown function (DUF976) contains similarity to Interpro domains IPR010381 (Protein of unknown function DUF976, Caenorhabditis species), IPR016125 (Peptidase C15, pyroglutamyl peptidase I-like)
34	C53A5.9	C53A5.9	n/a	chrV 14,557,956	contains similarity to Pfam domains PF01344 (Kelch motif) (5), PF07646 (Kelch motif) (3), PF02984 (Cyclin, C-terminal domain) contains similarity to Interpro domains IPR011043 (Galactose oxidase/kelch, beta-propeller), IPR004367 (Cyclin, C-terminal), IPR006652 (Kelch repeat type 1), IPR011498 (Kelch repeat type 2), IPR015916 (Galactose oxidase, beta-propeller), IPR013089 (Kelch related), IPR006651 (Kelch), IPR015915 (Kelch-type beta propeller)
35	K12H6.10	K12H6.10	n/a	chrII 2,822,965
36	C12D5.4	C12D5.4	n/a	chrV 7,672,548
37	cyp-25A5	F42A6.4	n/a	chrIV 3,328,559	C. elegans CYP-25A5 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002402 (Cytochrome P450, E-class, group II), IPR002403 (Cytochrome P450, E-class, group IV), IPR002397 (Cytochrome P450, B-class)
38	C46E10.2	C46E10.2	n/a	chrII 3,723,631
39	clec-2	B0454.7	n/a	chrII 3,021,991	C. elegans CLEC-2 protein; contains similarity to Pfam domains PF00431 (CUB domain) , PF00059 (Lectin C-type domain) (2)contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
40	C17B7.12	C17B7.12	n/a	chrV 3,353,590
41	srsx-2	F20E11.2	n/a	chrV 17,437,669	C. elegans SRSX-2 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
42	C06B3.1	C06B3.1	n/a	chrV 13,903,319	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR008365 (Prostanoid receptor), IPR003002 (7TM chemoreceptor, subfamily 1)
43	K02A2.5	K02A2.5	n/a	chrII 7,411,491
44	srh-208	C43D7.6	n/a	chrV 19,317,895	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
45	F13C5.1	F13C5.1	n/a	chrX 603,249
46	C17H1.8	C17H1.8	n/a	chrI 13,129,308	contains similarity to Pyrococcus furiosus DNA double-strand break repair rad50 ATPase.; SW:P58301
47	C04F5.2	C04F5.2	n/a	chrV 5,094,981
48	C54D2.2	C54D2.2	n/a	chrX 7,839,011
49	srz-31	H12I19.2	n/a	chrIV 14,138,796	C. elegans SRZ-31 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
50	srw-86	C25F9.7	n/a	chrV 19,400,392	C. elegans SRW-86 protein ;