UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	sra-23	T06G6.1	0	chrI 12,704,070	C. elegans SRA-23 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
2	C52A11.3	C52A11.3	n/a	chrII 10,737,705	contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
3	pik-1	K09B11.1	n/a	chrIV 13,419,126	The pik-1 gene encodes a pelle/IRAK kinase homolog that may be involved in apoptosis.
4	F14F8.9	F14F8.9	n/a	chrV 16,668,104	contains similarity to Interpro domain IPR002625 (Smr protein/MutS2 C-terminal)
5	C46G7.3	C46G7.3	n/a	chrIV 6,007,411	contains similarity to Interpro domain IPR001878 (Zinc finger, CCHC-type)
6	clec-163	Y39A1B.1	n/a	chrIII 10,795,241	C. elegans CLEC-163 protein; contains similarity to Pfam domains PF00092 (von Willebrand factor type A domain) , PF00059 (Lectin C-type domain) contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR002035 (von Willebrand factor, type A)
7	str-208	F26G5.2	n/a	chrV 4,957,686	C. elegans STR-208 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	F28H6.7	F28H6.7	n/a	chrX 14,116,353	contains similarity to Interpro domain IPR013032 (EGF-like region, conserved site)
9	C07D8.3	C07D8.3	n/a	chrX 7,361,807
10	srx-34	T01C4.4	n/a	chrV 7,119,646	C. elegans SRX-34 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
11	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	T27E4.5	T27E4.5	n/a	chrV 9,069,053	contains similarity to Pfam domain PF00095 WAP-type (Whey Acidic Protein) 'four-disulfide core' contains similarity to Interpro domain IPR008197 (Whey acidic protein, 4-disulphide core)
13	Y76A2B.6	Y76A2B.6	n/a	chrIII 13,552,896	Y76A2B.6 encodes a ortholog of human CD36 antigen (OMIM:173510, mutated in platelet glycoprotein IV deficiency); Y76A2B.6 is needed for cell corpse engulfment in the germline and in the three-fold embryo, and for migration of the anterior arm of the gonad.
14	W04D2.5	W04D2.5	n/a	chrV 12,493,975	contains similarity to Pfam domain PF00411 Ribosomal protein S11 contains similarity to Interpro domain IPR001971 (Ribosomal protein S11)
15	Y39F10A.1	Y39F10A.1	n/a	chrII 776,047
16	C55B6.4	C55B6.4	n/a	chrX 7,187,869
17	str-224	K10C9.8	n/a	chrV 1,057,769	C. elegans STR-224 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
18	sri-14	M01G12.1	n/a	chrI 12,135,356	C. elegans SRI-14 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
19	W03D2.9	W03D2.9	n/a	chrIV 4,074,075	contains similarity to Interpro domain IPR009151 (Basigin)
20	srh-127	F37B4.1	n/a	chrV 2,894,429	C. elegans SRH-127 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
21	sre-30	F57G9.2	n/a	chrII 12,405,637	C. elegans SRE-30 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
22	K02F3.7	K02F3.7	n/a	chrIII 836,776
23	Y53C12B.2	Y53C12B.2	n/a	chrII 9,740,855	contains similarity to Pfam domain PF00013 KH domain contains similarity to Interpro domains IPR004087 (K Homology), IPR004088 (K Homology, type 1)
24	str-113	Y39H10B.1	n/a	chrV 3,665,916	C. elegans STR-113 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
25	clec-39	T25E12.7	n/a	chrV 16,740,408	C. elegans CLEC-39 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR003990 (Pancreatitis-associated protein), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
26	gst-30	ZK546.11	n/a	chrII 4,934,462	C. elegans GST-30 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)
27	K10B4.1	K10B4.1	n/a	chrII 137,530	contains similarity to Pfam domain PF03098 Animal haem peroxidase contains similarity to Interpro domains IPR010255 (Haem peroxidase), IPR002007 (Haem peroxidase, animal)
28	clec-231	C29F3.4	n/a	chrV 15,350,031	C. elegans CLEC-231 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
29	C13B9.2	C13B9.2	n/a	chrIII 6,621,178	contains similarity to Pfam domain PF05161 MOFRL family contains similarity to Interpro domain IPR007835 (MOFRL)
30	srj-6	F31F4.8	n/a	chrV 653,904	C. elegans SRJ-6 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	T03E6.2	T03E6.2	n/a	chrV 16,582,078	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
32	str-211	C02E7.13	n/a	chrV 4,943,703	C. elegans STR-211 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
33	Y75B8A.34	Y75B8A.34	n/a	chrIII 12,360,286	contains similarity to Homo sapiens Kappa-type opioid receptor; ENSEMBL:ENSP00000265572
34	W06B3.1	W06B3.1	n/a	chrX 12,015,209	contains similarity to Pfam domain PF01467 Cytidylyltransferase contains similarity to Interpro domains IPR004821 (Cytidyltransferase-related), IPR005248 (Probable nicotinate-nucleotide adenylyltransferase), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR004820 (Cytidylyltransferase)
35	tbx-9	T07C4.6	n/a	chrIII 10,340,812	C. elegans TBX-9 protein; contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR001699 (Transcription factor, T-box)
36	K09F6.6	K09F6.6	n/a	chrII 2,277,012
37	R04A9.3	R04A9.3	n/a	chrX 378,980
38	T08G3.6	T08G3.6	n/a	chrV 16,446,543	contains similarity to Interpro domain IPR008975 ()
39	F28E10.2	F28E10.2	n/a	chrIV 4,563,722	contains similarity to Pfam domains PF00008 (EGF-like domain) , PF07974 (EGF-like domain) contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR000742 (EGF-like, type 3), IPR006209 (EGF-like), IPR007110 (Immunoglobulin-like), IPR003599 (Immunoglobulin subtype), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
40	Y17G7B.13	Y17G7B.13	n/a	chrII 12,045,368	contains similarity to Pfam domain PF06090 Domain of unknown function (DUF941) contains similarity to Interpro domain IPR009286 (Protein of unknown function DUF941)
41	srd-12	C39H7.6	n/a	chrIV 5,629,500	C. elegans SRD-12 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001073 (Complement C1q protein)
42	C25D7.9	C25D7.9	n/a	chrV 15,065,202
43	lgc-32	T19D7.1	n/a	chrX 674,438	C. elegans LGC-32 protein; contains similarity to Interpro domain IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
44	R52.5	R52.5	n/a	chrII 2,109,416	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domain IPR003326 (Protein of unknown function DUF130)
45	nas-10	K09C8.3	n/a	chrX 10,962,779	nas-10 encodes an astacin-like metalloprotease.
46	sru-12	Y45F10B.5	n/a	chrIV 13,583,783	C. elegans SRU-12 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
47	F56A11.4	F56A11.4	n/a	chrIV 550,691	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
48	K02F6.6	K02F6.6	n/a	chrII 2,530,385	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
49	F56C3.3	F56C3.3	n/a	chrX 1,358,147
50	str-67	K10C9.6	n/a	chrV 1,063,591	C. elegans STR-67 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)