UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	F02H6.6	F02H6.6	3e-167	chrIV 14,230,085	contains similarity to Interpro domain IPR000884 (Thrombospondin, type I)
2	BE10.1	BE10.1	n/a	chrIII 12,788,458	contains similarity to Homo sapiens PRO2015; TR:Q9P185
3	str-86	F59E11.14	n/a	chrV 8,983,013	C. elegans STR-86 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
4	K02H11.6	K02H11.6	n/a	chrV 1,534,154	contains similarity to Pfam domains PF00085 (Thioredoxin) , PF08534 (Redoxin) , PF00578 (AhpC/TSA family) contains similarity to Interpro domains IPR011594 (Thioredoxin-like), IPR013740 (Redoxin), IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR000866 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen), IPR013766 (Thioredoxin domain), IPR006662 (Thioredoxin-related)
5	Y45F3A.1	Y45F3A.1	n/a	chrIII 10,559,860	contains similarity to Homo sapiens Tropomyosin 2; ENSEMBL:ENSP00000367550
6	C25A8.5	C25A8.5	n/a	chrIV 7,000,530	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
7	C08E8.3	C08E8.3	n/a	chrV 18,351,418	contains similarity to Clostridium perfringens Probable Ser-type protease.; TR:Q8XHC4
8	clec-261	ZC15.6	n/a	chrV 20,287,601	C. elegans CLEC-261 protein; contains similarity to Interpro domains IPR000817 (Prion protein), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
9	F54D12.2	F54D12.2	n/a	chrII 1,399,803	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
10	D2005.6	D2005.6	n/a	chrI 7,790,102	contains similarity to Homo sapiens Fusion protein SYT-SSX1; ENSEMBL:ENSP00000269138
11	trf-1	F45G2.6	n/a	chrIII 13,431,808	The trf-1 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis.
12	C31G12.4	C31G12.4	n/a	chrV 18,177,707	contains similarity to Pfam domain PF00646 (F-box domain)
13	H04M03.11	H04M03.11	n/a	chrIV 5,883,356
14	Y4C6B.3	Y4C6B.3	n/a	chrIV 5,335,043	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR001411 (Tetracycline resistance protein, TetB), IPR011701 (Major facilitator superfamily MFS-1), IPR002229 (Blood group Rhesus C/E and D polypeptide), IPR016196 (MFS general substrate transporter)
15	F47B3.4	F47B3.4	n/a	chrI 3,961,620	contains similarity to Pfam domain PF03057 Protein of unknown function contains similarity to Interpro domains IPR006077 (Vinculin/alpha-catenin), IPR003267 (Small proline-rich), IPR004296 (Protein of unknown function DUF236), IPR000694 (Proline-rich region), IPR001399 (VP6 blue-tongue virus inner capsid protein), IPR000079 (High mobility group protein HMG14 and HMG17)
16	R107.2	R107.2	n/a	chrIII 9,044,850	contains similarity to Pfam domain PF01256 Carbohydrate kinase contains similarity to Interpro domain IPR000631 (Carbohydrate kinase)
17	ZK1290.10	ZK1290.10	n/a	chrII 7,552,859	contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR003582 (Metridin-like ShK toxin)
18	clec-154	F10F2.5	n/a	chrIII 4,639,461	C. elegans CLEC-154 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
19	Y17G7B.19	Y17G7B.19	n/a	chrII 12,110,327	contains similarity to Pfam domain PF01666 (DX module)
20	B0524.2	B0524.2	n/a	chrIII 1,896,968	contains similarity to Pfam domain PF01734 Patatin-like phospholipase contains similarity to Interpro domains IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR002641 (Patatin)
21	grl-2	T16G1.8	n/a	chrV 12,945,836	grl-2 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-2 is expressed in neurons, amphid socket cells, and other cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
22	Y70G10A.2	Y70G10A.2	n/a	chrIII 10,229,611	contains similarity to Pfam domains PF00008 (EGF-like domain) , PF07974 (EGF-like domain) contains similarity to Interpro domains IPR000742 (EGF-like, type 3), IPR006209 (EGF-like), IPR006210 (EGF), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
23	T10E9.6	T10E9.6	n/a	chrI 6,529,637	contains similarity to Pfam domain PF03134 TB2/DP1, HVA22 family contains similarity to Interpro domain IPR004345 (TB2/DP1 and HVA22 related protein)
24	F09E8.1	F09E8.1	n/a	chrIV 13,141,838	contains similarity to Pfam domain PF01666 DX module contains similarity to Interpro domains IPR011052 (Proteinase and amylase inhibitor), IPR002593 (Protein of unknown function DX)
25	F15H9.1	F15H9.1	n/a	chrI 12,157,921	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
26	AC7.3	AC7.3	n/a	chrIV 5,112,248
27	F14D7.1	F14D7.1	n/a	chrV 14,289,203	contains similarity to Pfam domain PF06887 Protein of unknown function (DUF1265) contains similarity to Interpro domain IPR009676 (Protein of unknown function DUF1265)
28	F23C8.8	F23C8.8	n/a	chrI 2,431,177	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
29	C44F1.2	C44F1.2	n/a	chrIII 3,769,375	contains similarity to Pfam domains PF01342 (SAND domain) , PF02178 (AT hook motif) contains similarity to Interpro domains IPR000637 (HMG-I and HMG-Y, DNA-binding), IPR010919 (SAND-like), IPR000770 (SAND)
30	F35B3.7	F35B3.7	n/a	chrX 17,038,997	contains similarity to Homo sapiens Leucine zipper putative tumor suppressor 2; ENSEMBL:ENSP00000359240
31	M70.4	M70.4	n/a	chrIV 2,258,333	M70.4 is orthologous to human O-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (FLJ20277; OMIM:606822), which when mutated leads to muscle-eye-brain disease.
32	clec-175	R08C7.6	n/a	chrIV 4,424,420	C. elegans CLEC-175 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
33	C29F5.5	C29F5.5	n/a	chrII 6,297,911
34	Y54E5A.3	Y54E5A.3	n/a	chrI 14,698,399	contains similarity to Escherichia coli Orf732.; TR:Q46767
35	M28.9	M28.9	n/a	chrII 10,641,581	contains similarity to Homo sapiens hypothetical protein; VG:OTTHUMP00000024599
36	lgc-30	F58H7.3	n/a	chrIV 932,249	C. elegans LGC-30 protein; contains similarity to Pfam domain PF02931 Neurotransmitter-gated ion-channel ligand binding domain contains similarity to Interpro domains IPR002394 (Nicotinic acetylcholine receptor, N-terminal), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding)
37	R13A1.1	R13A1.1	n/a	chrIV 7,220,097
38	Y47H9B.2	Y47H9B.2	n/a	chrI 11,745,783	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
39	C38H2.1	C38H2.1	n/a	chrIII 10,369,054	contains similarity to Pfam domains PF00566 (TBC domain) , PF02759 (RUN domain) contains similarity to Interpro domains IPR000195 (RabGAP/TBC), IPR004012 (RUN)
40	srv-12	T04B2.4	n/a	chrIV 10,052,440	C. elegans SRV-12 protein ;
41	nas-5	T23H4.3	n/a	chrI 9,887,167	nas-5 encodes an astacin-like metalloprotease; loss of nas-5 activity in an RNAi hypersensitive strain results in axon guidance defects, including a failure of DD/VD motoneuron commissures to reach the dorsal cord, defasciculation of the dorsal nerve cord, and midline crossing defects in the ventral nerve cord.
42	scrm-8	K08D10.7	n/a	chrIV 4,165,432	scrm-8 encodes a putative phospholipid scramblase required for normally short lifespan; SCRM-8 is homologous to human PLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1).
43	ZK353.3	ZK353.3	n/a	chrIII 8,396,275
44	C06C3.9	C06C3.9	n/a	chrII 9,377,271
45	Y41C4A.1	Y41C4A.1	n/a	chrIII 11,648,712	contains similarity to Oryza sativa Putative aspartate kinase.; TR:Q851Z6
46	ZC132.2	ZC132.2	n/a	chrV 4,311,620
47	F52F10.3	F52F10.3	n/a	chrV 1,540,095	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
48	ani-1	Y49E10.19	n/a	chrIII 12,449,658	ani-1 encodes one of three C. elegans anillins; ANI-1 activity is required in the early embryo for cortical contractile events, including polar body extrusion, membrane ruffling, and pseudocleavage; at later stages of development, ANI-1 also plays a role in cuticle formation, coordinated locomotion, vulval development, and male tail formation; in regulating cortical events, ANI-1 appears to function by positively regulating septin (UNC-59 and UNC-61) localization to the contractile ring as well as formation of septin- and NMY-2-containing cortical patches; in telophase embryos, ANI-1 localizes to the cell cortex and cleavage furrow.
49	F46B6.10	F46B6.10	n/a	chrV 9,801,717	contains similarity to Homo sapiens Hypothetical protein; TR:Q96QJ8
50	scrm-5	K08D10.8	n/a	chrIV 4,163,488	scrm-5 encodes a putative phospholipid scramblase homologous to human PLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1); scrm-5(RNAi) animals have no obvious phenotype.