UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	fbxa-24	F54D10.2	1.9999999999999998e-111	chrII 3,817,370	C. elegans FBXA-24 protein; contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
2	F46A8.7	F46A8.7	n/a	chrI 11,238,164	contains similarity to Homo sapiens hypothetical protein MGC35285; ENSEMBL:ENSP00000279688
3	F07C3.9	F07C3.9	n/a	chrV 9,254,456
4	T24F1.5	T24F1.5	n/a	chrII 11,319,376	contains similarity to Bombyx mori Lebocin 1/2 precursor.; SW:LEB1_BOMMO
5	Y73F4A.3	Y73F4A.3	n/a	chrIV 9,040,014	contains similarity to Pfam domain PF03351 DOMON domain contains similarity to Interpro domains IPR005018 (DOMON related), IPR008960 (Carbohydrate-binding family 9/cellobiose dehydrogenase, cytochrome), IPR013050 (DOMON)
6	ttr-27	R90.2	n/a	chrV 12,903,803	C. elegans TTR-27 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
7	F12D9.2	F12D9.2	n/a	chrX 8,646,792
8	C03G6.17	C03G6.17	n/a	chrV 7,380,393	contains similarity to Interpro domain IPR016181 (Acyl-CoA N-acyltransferase)
9	C34F11.8	C34F11.8	n/a	chrII 5,210,353	contains similarity to Interpro domain IPR002952 (Eggshell protein)
10	nlp-12	M01D7.5	n/a	chrI 1,843,618	nlp-12 encodes two predicted neuropeptide-like proteins; nlp-12 is part of a LQFamide neuropeptide family that has members in at least one other nematode species; nlp-12 is expressed in one tail neuron; as loss of nlp-12 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of nlp-12-encoded peptides in development and/or behavior is not yet known.
11	C17G10.7	C17G10.7	n/a	chrII 5,607,281
12	K01A2.10	K01A2.10	n/a	chrII 322,278	contains similarity to Homo sapiens Coiled-coil domain-containing protein 92; ENSEMBL:ENSP00000238156
13	ins-11	C17C3.4	n/a	chrII 5,556,897	ins-11 encodes an insulin-like peptide of the insulin superfamily of proteins (OMIM:176730, 147440); INS-11 is one of 38 insulin-like peptides in C. elegans and is expressed in the labial sensory neurons, the nerve ring, and other neurons; although the precise role of INS-11 in C. elegans development is not yet clear, loss of INS-11 function via RNA-mediated interference can result in animals that are smaller than wild type (Sma).
14	F36D1.7	F36D1.7	n/a	chrI 11,263,396	contains similarity to Bacteriophage T5 L-shaped tail fiber protein (LTF protein).; SW:VLTF_BPT5
15	F53A9.7	F53A9.7	n/a	chrX 8,716,682	contains similarity to Interpro domain IPR002395 (HMW kininogen)
16	F47B8.2	F47B8.2	n/a	chrV 14,316,299	contains similarity to Lyngbya lagerheimii CP 43 protein (Fragment).; TR:Q937F7
17	ttr-29	R90.4	n/a	chrV 12,906,429	C. elegans TTR-29 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
18	nlp-30	B0213.5	n/a	chrV 3,982,348	nlp-30 encodes five predicted neuropeptide-like proteins; in C. elegans, nlp-30 is part of the YGGWamide neuropeptide family that also contains nlp-24, nlp-25, and nlp-27-32; nlp-30 is expressed in the hypodermis, suggesting that the peptides it encodes may have a non-neuronal function; as loss of nlp-30 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of the nlp-30-encoded peptides in development and/or behavior is not yet known.
19	dhs-26	ZK816.5	n/a	chrX 3,361,621	dhs-26 encodes a short-chain dehydrogenase predicted to be mitochondrial.
20	nlp-7	F18E9.2	n/a	chrX 8,593,444	C. elegans NLP-7 protein ;
21	T07D1.3	T07D1.3	n/a	chrX 2,443,181	contains similarity to Interpro domain IPR016160 (Aldehyde dehydrogenase, conserved site)
22	tag-243	T04A8.4	n/a	chrIII 4,686,618	C. elegans TAG-243 protein; contains similarity to Interpro domain IPR000637 (HMG-I and HMG-Y, DNA-binding)
23	lact-6	C06A12.5	n/a	chrIV 17,430,817	lact-6 encodes a beta-lactamase domain-containing protein that contains a predicted signal sequence in its N terminus.
24	F47B8.4	F47B8.4	n/a	chrV 14,324,002	contains similarity to Pfam domain PF00462 Glutaredoxin contains similarity to Interpro domains IPR002109 (Glutaredoxin), IPR012336 (Thioredoxin-like fold)
25	nlp-8	D2005.2	n/a	chrI 7,801,131	C. elegans NLP-8 protein ;
26	C32H11.3	C32H11.3	n/a	chrIV 12,919,384	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domain IPR003366 (CUB-like region)
27	dhs-31	T04B2.6	n/a	chrIV 10,040,250	C. elegans DHS-31 protein; contains similarity to Pfam domain PF00106 short chain dehydrogenase contains similarity to Interpro domains IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding)
28	C08E8.4	C08E8.4	n/a	chrV 18,372,276	contains similarity to Pfam domain PF08719 Domain of unknown function (DUF1768) contains similarity to Interpro domain IPR012816 (Conserved hypothetical protein CHP02464)
29	F08G12.8	F08G12.8	n/a	chrX 11,317,416	contains similarity to Mus musculus Tenascin-R.; TR:Q8BYI9
30	cex-1	F56D1.6	n/a	chrII 5,448,034	C. elegans CEX-1 protein; contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)
31	nlp-37	F48B9.4	n/a	chrX 2,163,570	C. elegans NLP-37 protein ;
32	cal-2	C18E9.1	n/a	chrII 8,961,053	cal-2 encodes a calmodulin homolog required for embryonic development or viability; CAL-2 is closely similar to its paralogs CAL-1, CAL-3, CAL-4 and CMD-1.
33	F53F4.7	F53F4.7	n/a	chrV 13,613,185	contains similarity to Pfam domain PF03407 Protein of unknown function (DUF271) contains similarity to Interpro domain IPR005069 (Protein of unknown function DUF271)
34	gst-41	R13D7.7	n/a	chrV 7,398,864	C. elegans GST-41 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)
35	C17B7.4	C17B7.4	n/a	chrV 3,339,687	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR003559 (Cytolethal distending toxin C), IPR002542 (Protein of unknown function DUF19)
36	C07A9.8	C07A9.8	n/a	chrIII 9,688,522	contains similarity to Pfam domain PF01062 Bestrophin contains similarity to Interpro domain IPR000615 (Bestrophin)
37	nlp-31	B0213.6	n/a	chrV 3,980,323	nlp-31 encodes five predicted neuropeptide-like proteins; in C. elegans, nlp-31 is part of the YGGWamide neuropeptide family that also contains nlp-24, nlp-25, and nlp-27-32; nlp-31 is expressed in the hypodermis, suggesting that the peptides it encodes may have a non-neuronal function; nlp-31 expression is also detected in precomma-stage embryos; as loss of nlp-31 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of the nlp-31-encoded peptides in development and/or behavior is not yet known.
38	F53A9.6	F53A9.6	n/a	chrX 8,713,583	contains similarity to Interpro domains IPR002952 (Eggshell protein), IPR002395 (HMW kininogen)
39	tyr-3	F21C3.2	n/a	chrI 7,276,425	C. elegans TYR-3 protein; contains similarity to Pfam domains PF00264 (Common central domain of tyrosinase) , PF01549 (ShK domain-like) (4)contains similarity to Interpro domains IPR008922 (Di-copper centre-containing), IPR002227 (Tyrosinase), IPR003582 (Metridin-like ShK toxin)
40	nlp-5	F35C11.1	n/a	chrII 8,243,059	C. elegans NLP-5 protein ;
41	T28A11.5	T28A11.5	n/a	chrV 3,270,895	contains similarity to Pfam domain PF01579 Domain of unknown function DUF19 contains similarity to Interpro domains IPR016638 (Uncharacterised conserved protein UPF0376), IPR003559 (Cytolethal distending toxin C), IPR002542 (Protein of unknown function DUF19)
42	F58E10.7	F58E10.7	n/a	chrV 13,993,064	contains similarity to Xenopus laevis FK506-binding protein.; TR:Q9I8P8
43	T10G3.1	T10G3.1	n/a	chrV 13,471,322	contains similarity to Saccharomyces cerevisiae interacts with Sin1p; SGD:YER047C
44	T19D12.3	T19D12.3	n/a	chrII 6,660,581
45	gst-22	F21H7.1	n/a	chrV 16,231,635	C. elegans GST-22 protein; contains similarity to Pfam domains PF00043 (Glutathione S-transferase, C-terminal domain) , PF02798 (Glutathione S-transferase, N-terminal domain) contains similarity to Interpro domains IPR012336 (Thioredoxin-like fold), IPR012335 (Thioredoxin fold), IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR010987 (Glutathione S-transferase, C-terminal-like)
46	nlp-35	C33A12.2	n/a	chrIV 9,518,633	C. elegans NLP-35 protein ;
47	F18G5.6	F18G5.6	n/a	chrX 9,263,128
48	F11C1.4	F11C1.4	n/a	chrX 12,979,059	contains similarity to Drosophila melanogaster Flybase gene name is CG9186-PA;; FLYBASE:CG9186
49	C25G4.2	C25G4.2	n/a	chrIV 12,443,605	contains similarity to Pfam domain PF03959 Serine hydrolase (FSH1) contains similarity to Interpro domain IPR005645 (Protein of unknown function DUF341)
50	K02A6.2	K02A6.2	n/a	chrX 8,224,536