UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	K12B6.7	K12B6.7	0	chrV 6,297,759
2	W09D10.4	W09D10.4	n/a	chrIII 10,713,760	contains similarity to Pfam domain PF07228 Stage II sporulation protein E (SpoIIE) contains similarity to Interpro domains IPR001932 (Protein phosphatase 2C-related), IPR010822 (Sporulation stage II, protein E C-terminal)
3	srt-12	E03D2.4	n/a	chrV 4,241,727	C. elegans SRT-12 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
4	srbc-65	Y32B12B.3	n/a	chrV 16,551,603	C. elegans SRBC-65 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
5	str-76	C01B4.10	n/a	chrV 2,514,913	C. elegans STR-76 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
6	sri-25	C41G6.10	n/a	chrV 15,218,422	C. elegans SRI-25 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	C55A1.9	C55A1.9	n/a	chrV 15,626,819	contains similarity to Interpro domain IPR000694 (Proline-rich region)
8	tbx-38	C24H11.3	n/a	chrIII 11,785,014	tbx-38 encodes a T box transcription factor; during embryonic development, tbx-38 functions redundantly with tbx-37 to effect Notch-mediated pharyngeal mesoderm induction in descendants of the ABa blastomere; in addition, tbx-38 and tbx-37 are required for proper cell fate specification of other ABa descendants, such as those that give rise to hypodermal tissue; TBX-38 expression appears to be limited to the 8 ABa descendents at the 24-cell stage of embryogenesis, with expression diminishing markedly during the next cell cycle; negative regulation of TBX-38 expression in ABp descendants depends upon Notch signaling, while negative regulation of expression in EMS descendents is likely controlled, in part, by ref-1 and unc-37, which encode bHLH and Groucho-like proteins, respectively.
9	W02D9.8	W02D9.8	n/a	chrI 12,558,734	contains similarity to Interpro domain IPR004692 (Preprotein translocase SecG subunit)
10	C06C3.7	C06C3.7	n/a	chrII 9,385,835	contains similarity to Saccharomyces cerevisiae Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases (Mes1p and Ygl245wp), delivering tRNA to them, stimulating catalysis, and ensuring their localization to the cytoplasm; also binds quadruplex nucleic acids; SGD:YGL105W
11	C31E10.3	C31E10.3	n/a	chrX 13,987,732	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
12	T25B6.3	T25B6.3	n/a	chrX 9,027,882
13	Y38F1A.4	Y38F1A.4	n/a	chrII 12,967,952	contains similarity to Mus musculus Neuropeptide Y receptor type 6 (NPY6-R) (Pancreatic polypeptidesreceptor 2) (PP2).; SW:NY6R_MOUSE
14	srx-6	F07G11.8	n/a	chrV 7,312,511	C. elegans SRX-6 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
15	nas-16	K03B8.1	n/a	chrV 11,392,697	nas-16 encodes an astacin-like metalloprotease.
16	R10F2.5	R10F2.5	n/a	chrIII 2,924,200	contains similarity to Interpro domain IPR000443 (Islet amyloid polypeptide)
17	C13C4.6	C13C4.6	n/a	chrV 12,123,359	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
18	rsr-1	F28D9.1	n/a	chrI 11,179,945	C. elegans RSR-1 protein; contains similarity to Pfam domain PF01480 PWI domain contains similarity to Interpro domains IPR002483 (Splicing factor PWI), IPR000694 (Proline-rich region), IPR005819 (Histone H5), IPR002185 (Dopamine D4 receptor)
19	srh-223	F47C12.3	n/a	chrIV 3,982,749	C. elegans SRH-223 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
20	E03G2.1	E03G2.1	n/a	chrX 15,927,754	contains similarity to Plasmodium falciparum Glutamate--cysteine ligase (EC 6.3.2.2).; TR:Q9TY17
21	M153.2	M153.2	n/a	chrX 12,152,642	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF05978 (Eukaryotic protein of unknown function (DUF895)) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
22	F44F1.2	F44F1.2	n/a	chrI 13,253,455
23	T07G12.5	T07G12.5	n/a	chrIV 10,543,255	contains similarity to Pfam domain PF00860 Permease family contains similarity to Interpro domain IPR006043 (Xanthine/uracil/vitamin C permease)
24	F49D11.7	F49D11.7	n/a	chrI 10,923,733
25	K02F6.6	K02F6.6	n/a	chrII 2,530,385	contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
26	R08C7.11	R08C7.11	n/a	chrIV 4,454,848
27	C24A3.8	C24A3.8	n/a	chrX 9,006,620
28	sre-37	F15A4.3	n/a	chrII 12,466,610	C. elegans SRE-37 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
29	T10E9.5	T10E9.5	n/a	chrI 6,522,462
30	W02D9.9	W02D9.9	n/a	chrI 12,557,310	contains similarity to Bacteroides thetaiotaomicron Arabinose-proton symporter (Arabinose transporter).; TR:Q8AAL0
31	fbxa-137	T27B7.7	n/a	chrV 2,280,414	C. elegans FBXA-137 protein; contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
32	ZC204.6	ZC204.6	n/a	chrII 1,644,534
33	npr-1	C39E6.6	n/a	chrX 4,768,551	npr-1 encodes a predicted G protein-coupled neuropeptide receptor that is homologous to the mammalian neuropeptide Y (NPY) receptor (OMIM:162641) required for regulating anxiety, food consumption, and pain sensation; in C. elegans, NPR-1 is involved in ethological variations of social behavior such as social versus solitary feeding; NPR-1 also affects some aspect of UNC-6/netrin-mediated branching of motor neurons, as strong npr-1 mutations can suppress abnormal migration of ventral nerve cord neurons induced by overexpression of UNC-6 lacking domain C; NPR-1 is expressed predominantly in the nervous system, and particularly in the AQR, PQR, and URX neurons that are exposed to the body fluid.
34	K10B4.1	K10B4.1	n/a	chrII 137,530	contains similarity to Pfam domain PF03098 Animal haem peroxidase contains similarity to Interpro domains IPR010255 (Haem peroxidase), IPR002007 (Haem peroxidase, animal)
35	str-149	Y32B12B.5	n/a	chrV 16,574,182	C. elegans STR-149 protein ;
36	ric-19	C32E8.7	n/a	chrI 3,779,897	The ric-19 gene encodes an evolutionarily conserved cytosolic protein involved in neuroendocrine secretion via association with secretory vesicles.
37	C08B6.10	C08B6.10	n/a	chrV 10,126,265	contains similarity to Interpro domains IPR006030 (Molluscan rhodopsin C-terminal tail), IPR000694 (Proline-rich region)
38	sdz-35	ZC239.12	n/a	chrII 3,208,304	C. elegans SDZ-35 protein; contains similarity to Pfam domain PF02214 K+ channel tetramerisation domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR003131 (Potassium channel, voltage dependent, Kv, tetramerisation)
39	R01H10.5	R01H10.5	n/a	chrIII 10,257,869	contains similarity to Homo sapiens Similar to TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa; ENSEMBL:ENSP00000218510
40	srj-37	F48G7.1	n/a	chrV 639,279	C. elegans SRJ-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
41	glb-25	T06A1.4	n/a	chrV 1,949,042	glb-25 encodes a globin required for normally rapid growth in mass RNAi assays.
42	col-9	F54B11.1	n/a	chrX 13,590,542	col-9 encodes a collagen protein.
43	E02H9.1	E02H9.1	n/a	chrIII 2,468,952
44	F53C3.8	F53C3.8	n/a	chrII 3,891,751
45	clec-118	W04H10.4	n/a	chrII 610,423	C. elegans CLEC-118 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
46	str-217	Y102A5C.28	n/a	chrV 16,999,587	C. elegans STR-217 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
47	C10E2.4	C10E2.4	n/a	chrX 16,750,349
48	R12C12.4	R12C12.4	n/a	chrII 6,039,457
49	dpr-1	R10D12.2	n/a	chrV 13,941,139	dpr-1 encodes a putative nuclear hormone receptor that affects endoderm differentiation and may promote entry into the dauer state and maintenance of the dauer state; expressed in the endoderm lineage and localization appears dependent on growth conditions.
50	T05C12.8	T05C12.8	n/a	chrII 8,189,001	contains similarity to Interpro domain IPR002110 (Ankyrin)