UCSC C. elegans Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC C. elegans Gene Sorter

genome assembly search

sort by display output

#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	M04G7.2	M04G7.2	0	chrIV 459,290	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
2	AH10.1	AH10.1	n/a	chrV 14,147,624	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
3	M05B5.1	M05B5.1	0.0000002	chrI 7,178,689	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
4	F36A2.12	F36A2.12	n/a	chrI 8,826,422
5	spe-26	R10H10.2	n/a	chrIV 10,390,752	spe-26 encodes a Kelch motif-containing protein similar to the Drosophila proteins kelch and diablo and the Limulus (horseshoe crab) actin-bundling protein scruin; SPE-26 activity is required for several processes including embryogenesis, spermatogenesis, thermotolerance, and regulation of lifespan; SPE-26 mRNA is detected in spermatogonial cells and spermatocytes, but not in spermatids.
6	F33D11.7	F33D11.7	n/a	chrI 5,850,957	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
7	Y69E1A.4	Y69E1A.4	n/a	chrIV 10,955,913	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
8	C04G2.5	C04G2.5	n/a	chrIV 10,094,710	contains similarity to Arabidopsis thaliana Putative auxin-induced protein.; TR:Q9SKP3
9	C38C10.3	C38C10.3	n/a	chrIII 9,384,785	contains similarity to Pfam domain PF04370 Domain of unknown function (DUF508) contains similarity to Interpro domain IPR007465 (Protein of unknown function DUF508)
10	ZK484.6	ZK484.6	n/a	chrI 6,090,487	contains similarity to Pfam domain PF00300 Phosphoglycerate mutase family contains similarity to Interpro domains IPR001345 (Phosphoglycerate/bisphosphoglycerate mutase), IPR013078 (Phosphoglycerate mutase)
11	ZK507.1	ZK507.1	n/a	chrIII 9,100,387	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
12	F56F3.4	F56F3.4	n/a	chrIII 4,469,813	contains similarity to Pfam domains PF00240 (Ubiquitin family) , PF01428 (AN1-like Zinc finger) contains similarity to Interpro domains IPR000058 (Zinc finger, AN1-type), IPR000626 (Ubiquitin)
13	C50F2.5	C50F2.5	n/a	chrI 3,896,598	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
14	T25D10.1	T25D10.1	n/a	chrII 6,404,207
15	C55C3.4	C55C3.4	n/a	chrIV 5,677,163	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
16	K06A5.3	K06A5.3	n/a	chrI 6,467,184	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
17	ssp-32	F32B6.7	n/a	chrIV 9,895,754	C. elegans SSP-32 protein; contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
18	F58G1.3	F58G1.3	n/a	chrII 12,927,067	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
19	M70.1	M70.1	n/a	chrIV 2,249,128	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR003004 (Bacterial general secretion pathway protein F), IPR003125 (Protein of unknown function WSN)
20	C05C12.1	C05C12.1	n/a	chrIV 11,254,815	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
21	F14F7.4	F14F7.4	n/a	chrIII 13,028,908	contains similarity to Interpro domain IPR003944 (Protease-activated receptor 4)
22	F38H4.4	F38H4.4	9.999999999999999e-20	chrIV 11,849,205	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
23	T28C6.5	T28C6.5	n/a	chrIV 8,822,105	contains similarity to Interpro domains IPR000909 (Phospholipase C, phosphatidylinositol-specific , X region), IPR000023 (Phosphofructokinase)
24	B0393.4	B0393.4	n/a	chrIII 4,761,650	contains similarity to Interpro domain IPR000694 (Proline-rich region)
25	K09C6.8	K09C6.8	n/a	chrV 841,718	contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
26	C09H5.7	C09H5.7	n/a	chrV 8,084,660	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
27	T23F6.3	T23F6.3	n/a	chrIV 12,723,822	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
28	C43F9.6	C43F9.6	n/a	chrIV 10,591,935	contains similarity to Pfam domain PF00287 Sodium / potassium ATPase beta chain contains similarity to Interpro domain IPR000402 (ATPase, P-type cation exchange, beta subunit)
29	Y44A6D.5	Y44A6D.5	n/a	chrV 20,797,500	contains similarity to Pfam domain PF01063 Aminotransferase class IV contains similarity to Interpro domains IPR001544 (Aminotransferase, class IV), IPR005786 (Branched-chain amino acid aminotransferase II)
30	C01G10.14	C01G10.14	n/a	chrV 15,105,627	contains similarity to Pfam domain PF03147 Ferredoxin-fold anticodon binding domain contains similarity to Interpro domain IPR005121 (Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding)
31	F36H12.3	F36H12.3	n/a	chrIV 5,273,494	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR005819 (Histone H5), IPR000533 (Tropomyosin)
32	C35D10.3	C35D10.3	n/a	chrIII 4,869,534
33	C08F11.10	C08F11.10	n/a	chrIV 13,648,607	contains similarity to Bacteroides thetaiotaomicron TPR-repeat-containing protein.; TR:Q8A5L6
34	F31E8.5	F31E8.5	n/a	chrII 6,806,093
35	K09E4.1	K09E4.1	n/a	chrII 14,138,852	contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core)
36	F58D2.2	F58D2.2	n/a	chrIV 13,190,575	contains similarity to Homo sapiens Small intestinal mucin MUC3; TR:O14760
37	F36A2.11	F36A2.11	n/a	chrI 8,822,940	contains similarity to Pyrococcus furiosus Hypothetical protein PF2017.; TR:Q8TZH6
38	Y54E2A.7	Y54E2A.7	n/a	chrII 14,772,378	contains similarity to Saccharomyces cerevisiae DNA Helicase; identified as an ExtraCellular Mutant; homology exists between ECM32 and two other identified DNA helicases, DNA2 and NAM7; SGD:YER176W
39	F56A11.6	F56A11.6	n/a	chrIV 581,274	contains similarity to Interpro domains IPR000175 (Sodium:neurotransmitter symporter), IPR000533 (Tropomyosin)
40	F13A7.1	F13A7.1	n/a	chrV 16,377,088	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000363 (Adrenergic receptor, alpha-1A), IPR002952 (Eggshell protein), IPR000535 (Major sperm protein)
41	cpb-2	C30B5.3	n/a	chrII 6,193,942	cpb-2 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog, expressed specifically in the spermatogenic germ line; CPB-2 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis.
42	T27F6.1	T27F6.1	n/a	chrI 12,472,050	contains similarity to Pfam domain PF02485 Core-2/I-Branching enzyme contains similarity to Interpro domain IPR003406 (Glycosyl transferase, family 14)
43	ZK783.3	ZK783.3	n/a	chrIII 7,647,539	contains similarity to Homo sapiens 55 kDa protein; ENSEMBL:ENSP00000273725
44	F36H12.9	F36H12.9	n/a	chrIV 5,257,678	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
45	F33D11.1	F33D11.1	n/a	chrI 5,852,462	contains similarity to Pfam domain PF00412 LIM domain contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)
46	Y116A8C.24	Y116A8C.24	n/a	chrIV 17,069,820	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
47	nspb-7	C01G12.2	n/a	chrII 14,578,358	C. elegans NSPB-7 protein ;
48	T25B9.4	T25B9.4	n/a	chrIV 10,756,710	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) , PF00017 (SH2 domain) contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
49	F36H1.3	F36H1.3	2e-43	chrIV 11,050,996	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000694 (Proline-rich region), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
50	C49A1.3	C49A1.3	n/a	chrI 14,218,454	contains similarity to Pfam domain PF01062 Bestrophin contains similarity to Interpro domain IPR000615 (Bestrophin)