UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	W02A2.8	W02A2.8	1.0000000000000001e-75	chrIV 13,356,775
2	Y45F10B.8	Y45F10B.8	n/a	chrIV 13,577,771	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000533 (Tropomyosin)
3	T05D4.5	T05D4.5	n/a	chrIII 13,582,099	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein), IPR000533 (Tropomyosin)
4	ZK930.4	ZK930.4	n/a	chrII 11,908,092	contains similarity to Homo sapiens Similar to hypothetical protein FLJ20094; ENSEMBL:ENSP00000324274
5	F46F5.6	F46F5.6	n/a	chrII 814,673	contains similarity to Interpro domain IPR000104 (Antifreeze protein, type I)
6	M162.7	M162.7	n/a	chrV 19,789,204	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
7	ZC262.4	ZC262.4	n/a	chrIII 8,333,867
8	F36H12.4	F36H12.4	n/a	chrIV 5,269,346
9	F13E9.5	F13E9.5	n/a	chrIV 10,883,638	contains similarity to Helicobacter pylori;Helicobacter pylori J99 Hypothetical protein HP0031/JHP0027.; SW:Y031_HELPY
10	F10E9.2	F10E9.2	n/a	chrIII 8,313,421	contains similarity to Interpro domain IPR001841 (Zinc finger, RING-type)
11	C09H10.9	C09H10.9	n/a	chrII 11,105,179
12	F20B6.1	F20B6.1	n/a	chrX 4,200,926	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
13	ZC412.9	ZC412.9	n/a	chrV 14,881,691	contains similarity to Tetrahymena thermophila Micronuclear linker histone polyprotein (MIC LH) [Contains:sMicronuclear linker histone-alpha; Micronuclear linker histone-beta;sMicronuclear linker histone-delta; Micronuclear linker histone-gamma].; SW:P40631
14	R04B5.11	R04B5.11	n/a	chrV 10,090,998	contains similarity to Homo sapiens Hypothetical protein; ENSEMBL:ENSP00000248104
15	T20F5.5	T20F5.5	n/a	chrI 3,918,806	contains similarity to Homo sapiens Isoform E of Proteoglycan-4 precursor; ENSEMBL:ENSP00000356454
16	dlc-6	Y106G6G.3	n/a	chrI 10,323,861	dlc-6 encodes a putative dynein light chain 1; DLC-6 is orthologous to human DYNLL1 (OMIM:601562) and DYNLL2 (OMIM:608942), but much more divergent from them than its paralog DLC-1; DLC-6's other paralogs are DLC-2/-5; DLC-6 has no obvious function in mass RNAi assays.
17	R10D12.10	R10D12.10	n/a	chrV 13,957,221	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
18	Y51A2B.6	Y51A2B.6	n/a	chrV 18,393,120	contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
19	F59A6.2	F59A6.2	n/a	chrII 5,015,006	contains similarity to Homo sapiens High mobility group protein 1-like 10; ENSEMBL:ENSP00000215935
20	Y18D10A.21	Y18D10A.21	n/a	chrI 12,930,221	contains similarity to Watermelon silver mottle virus L protein.; TR:Q9DSQ1
21	T19D12.5	T19D12.5	n/a	chrII 6,635,499	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
22	B0207.9	B0207.9	n/a	chrI 5,957,923
23	mab-9	T27A1.6	n/a	chrII 518,813	mab-9 encodes a member of the T-box family of transcriptional regulators containing a 200-amino acid T-box DNA-binding domain most similar to mouse Brachyury; mab-9 is involved in hindgut and male tail development, specifically affecting the fate of two posterior blast cells in the hindgut, B and F; in the male this results in a grossly abnormal tail lacking spicules, and renders them incapable of mating; in the hermaphrodite this results in hindgut defects; mab-9 may also be part of a network of T-box genes that includes tbx-8, tbx-9 and vab-7 and is important for the correct patterning of posterior cells in the developing embryo; mab-9 affects movement to some extent though the basis for this defect is unknown; MAB-9 localizes to the nucleus of B and F and their descendents during development.
24	K09G1.2	K09G1.2	n/a	chrV 9,590,914	contains similarity to Carnobacterium piscicola Putative ABC transporter PisT.; TR:Q93QC9
25	W03D8.5	W03D8.5	n/a	chrI 2,817,203	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
26	C50D2.3	C50D2.3	n/a	chrII 106,848	contains similarity to Pfam domain PF00595 PDZ domain (Also known as DHR or GLGF) contains similarity to Interpro domain IPR001478 (PDZ/DHR/GLGF)
27	K05F1.8	K05F1.8	n/a	chrII 5,799,460
28	F32B4.2	F32B4.2	n/a	chrI 11,513,362	contains similarity to Interpro domain IPR002056 (Protein import receptor MAS20)
29	C34B2.4	C34B2.4	n/a	chrI 10,672,056	contains similarity to Pfam domain PF00412 LIM domain contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)
30	B0334.10	B0334.10	n/a	chrII 11,518,945	contains similarity to Vaccinia virus TB17L.; TR:Q9JF36
31	K06H7.8	K06H7.8	n/a	chrIII 8,097,370	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
32	clec-129	W10G11.15	n/a	chrII 3,572,181	C. elegans CLEC-129 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
33	Y40H4A.2	Y40H4A.2	n/a	chrV 14,584,349	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
34	clec-142	K01C8.8	n/a	chrII 8,279,792	C. elegans CLEC-142 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
35	fbxa-196	T05H4.2	n/a	chrV 6,449,403	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
36	C27B7.6	C27B7.6	n/a	chrIV 8,904,670	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR000694 (Proline-rich region), IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
37	ZC581.2	ZC581.2	n/a	chrI 6,656,611	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR008271 (Serine/threonine protein kinase, active site), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
38	ZK1248.5	ZK1248.5	n/a	chrII 5,811,119	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domains IPR001940 (Peptidase S1C, HrtA/DegP2/Q/S), IPR009658 (Protein of unknown function DUF1248)
39	C18E9.8	C18E9.8	n/a	chrII 8,986,939	C18E9.8 is orthologous to the human gene JOINED TO JAZF1 (JJAZ1; OMIM:606245), which when mutated leads to disease.
40	C04E6.5	C04E6.5	n/a	chrV 5,903,504	contains similarity to Pfam domain PF00443 Ubiquitin carboxyl-terminal hydrolase contains similarity to Interpro domain IPR001394 (Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)
41	C56C10.6	C56C10.6	n/a	chrII 6,580,455	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
42	col-53	M01A12.1	n/a	chrI 5,645,857	C. elegans COL-53 protein; contains similarity to Pfam domain PF01391 Collagen triple helix repeat (20 copies) contains similarity to Interpro domains IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
43	fbxa-178	F17A9.1	n/a	chrV 6,116,834	F17A9.1 encodes a divergent ONECUT class CUT homeobox protein with a single N-terminal cut domain; F17A9.1 has an atypical tyrosine residue at position 48 of its homeodomain rather than a phenylalanine or tryptophan residue; the cut domain may be a compact DNA-binding domain composed of alpha helices; phylogenetically, F17A9.1 is (somewhat distantly) affiliated with C17H12.9, Drosophila ONECUT, and mammalian HNF6 proteins; F17A9.1 has no obvious function in mass RNAi assays.
44	Y45F10B.2	Y45F10B.2	n/a	chrIV 13,595,366	contains similarity to Mycoplasma pulmonis Hypothetical protein MYPU_6700.; TR:Q98PP9
45	R155.2	R155.2	n/a	chrIII 1,967,000	contains similarity to Pfam domains PF02206 (Domain of unknown function) , PF00102 (Protein-tyrosine phosphatase) contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR013992 (Adenylate cyclase-associated CAP, N-terminal), IPR000387 (Protein-tyrosine phosphatase), IPR003125 (Protein of unknown function WSN)
46	B0511.11	B0511.11	n/a	chrI 10,649,379
47	Y43F8A.2	Y43F8A.2	n/a	chrV 19,373,855	contains similarity to Homo sapiens Cytokine receptor common beta chain precursor; ENSEMBL:ENSP00000262825
48	C08H9.10	C08H9.10	n/a	chrII 9,854,672	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
49	C18H7.7	C18H7.7	n/a	chrIV 596,081
50	Y57G11C.6	Y57G11C.6	n/a	chrIV 14,759,618	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)