UCSC S. cerevisiae Gene Sorter

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

UCSC S. cerevisiae Gene Sorter

genome assembly search

sort by display output

#	Name	SGD ORF	Module	BLASTP E-Value	Genome Position	Description
1	ISY1	YJR050W	391	n/a	chrX 529,050	Member of NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of spliceosome containing U2, U5, and U6 snRNAs, interacts with Prp16p to modulate splicing fidelity isy1 syf2 cells have defective spindles
2	UBC1	YDR177W	391	n/a	chrIV 817,201	Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal proteins plays a role in vesicle biogenesis and ER-associated protein degradation (ERAD) component of the cellular stress response
3	AMD2	YDR242W	391	n/a	chrIV 947,631	Putative amidase
4	MF(ALPHA)2	YGL089C	391	n/a	chrVII 344,972	Mating pheromone alpha-factor, made by alpha cells interacts with mating type a cells to induce cell cycle arrest and other responses leading to mating also encoded by MF(ALPHA)1, which is more highly expressed than MF(ALPHA)2
5	MUD1	YBR119W	391	n/a	chrII 479,830	U1 snRNP A protein, homolog of human U1-A involved in nuclear mRNA splicing
6	PEP7	YDR323C	391	n/a	chrIV 1,113,253	Multivalent adaptor protein that facilitates vesicle-mediated vacuolar protein sorting by ensuring high-fidelity vesicle docking and fusion, which are essential for targeting of vesicles to the endosome required for vacuole inheritance
7	MAC1	YMR021C	391	n/a	chrXIII 317,791	Copper-sensing transcription factor involved in regulation of genes required for high affinity copper transport
8	DID4	YKL002W	391	n/a	chrXI 438,161	Class E Vps protein of the ESCRT-III complex, required for sorting of integral membrane proteins into lumenal vesicles of multivesicular bodies, and for delivery of newly synthesized vacuolar enzymes to the vacuole, involved in endocytosis
9	RTG3	YBL103C	391	n/a	chrII 22,806	Basic helix-loop-helix-leucine zipper (bHLH/Zip) transcription factor that forms a complex with another bHLH/Zip protein, Rtg1p, to activate the retrograde (RTG) and TOR pathways
10	YNG2	YHR090C	391	n/a	chrVIII 284,201	Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A has similarity to the human tumor suppressor ING1 and its isoforms ING4 and ING5
11	STN1	YDR082W	391	0	chrIV 611,183	Telomere end-binding and capping protein, plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping
12	SAW1	YAL027W	391	n/a	chrI 95,079	Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand break repair via single-strand annealing green fluorescent protein (GFP)-fusion protein localizes to the nucleus
13	ACA1	YER045C	391	n/a	chrV 240,766	Basic leucine zipper (bZIP) transcription factor of the ATF/CREB family, may regulate transcription of genes involved in utilization of non-optimal carbon sources
14	YEN1	YER041W	391	n/a	chrV 233,600	Holliday junction resolvase localization is cell-cycle dependent and regulated by Cdc28p phosphorylation homolog of human GEN1 and has similarity to S. cerevisiae endonuclease Rth1p
15	PCL6	YER059W	391	n/a	chrV 273,255	Pho85p cyclin of the Pho80p subfamily forms the major Glc8p kinase together with Pcl7p and Pho85p involved in the control of glycogen storage by Pho85p stabilized by Elongin C binding
16	TID3	YIL144W	391	n/a	chrIX 79,111	Component of the evolutionarily conserved kinetochore-associated Ndc80 complex (Ndc80p-Nuf2p-Spc24p-Spc25p) conserved coiled-coil protein involved in chromosome segregation, spindle checkpoint activity, kinetochore assembly and clustering
17	IST3	YIR005W	391	n/a	chrIX 365,112	Component of the U2 snRNP, required for the first catalytic step of splicing and for spliceosomal assembly interacts with Rds3p and is required for Mer1p-activated splicing
18	MVB12	YGR206W	391	n/a	chrVII 910,584	ESCRT-I subunit required to stabilize oligomers of the ESCRT-I core complex (Stp22p, Vps28p, Srn2p), which is involved in ubiquitin-dependent sorting of proteins into the endosome deletion mutant is sensitive to rapamycin and nystatin
19	FAR3	YMR052W	391	n/a	chrXIII 379,893	Protein involved in recovery from cell cycle arrest in response to pheromone, in a Far1p-independent pathway interacts with Far7p, Far8p, Far9p, Far10p, and Far11p localizes to the endoplasmic reticulum
20	PET130	YJL023C	391	n/a	chrX 397,876	Protein required for respiratory growth the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
21	COX16	YJL003W	391	n/a	chrX 432,822	Mitochondrial inner membrane protein, required for assembly of cytochrome c oxidase
22	YJR011C	YJR011C	391	n/a	chrX 459,033	Putative protein of unknown function GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS
23	YJR012C	YJR012C	391	n/a	chrX 460,106	Essential protein of unknown function proposed involvement in transport based on mass spectrometry analysis of copurifying proteins partially overlaps neighboring ORF, GPI14/YJR013W
24	NBP1	YLR457C	391	n/a	chrXII 1,056,291	Spindle pole body (SPB) component, required for the insertion of the duplication plaque into the nuclear membrane during SPB duplication essential for bipolar spindle formation component of the Mps2p-Bbp1p complex
25	COG7	YGL005C	391	n/a	chrVII 490,127	Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p), a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments
26	YGR016W	YGR016W	391	n/a	chrVII 522,547	Putative protein of unknown function
27	YGR122W	YGR122W	391	n/a	chrVII 734,539	Probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex null mutant does not properly process Rim101p and has decreased resistance to rapamycin GFP-fusion protein is cytoplasmic
28	YGR168C	YGR168C	391	n/a	chrVII 833,917	Putative protein of unknown function YGR168C is not an essential gene
29	FYV6	YNL133C	391	n/a	chrXIV 374,431	Protein of unknown function, required for survival upon exposure to K1 killer toxin proposed to regulate double-strand break repair via non-homologous end-joining
30	DOS2	YDR068W	391	n/a	chrIV 584,179	Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
31	DYN2	YDR424C	391	n/a	chrIV 1,319,614	Cytoplasmic light chain dynein, microtubule motor protein proposed to be involved in the assembly of the nuclear pore complex
32	SLU7	YDR088C	391	n/a	chrIV 619,071	RNA splicing factor, required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing interacts with Prp18p contains zinc knuckle domain
33	VPS71	YML041C	391	n/a	chrXIII 195,334	Nucleosome-binding component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A required for vacuolar protein sorting
34	INP1	YMR204C	391	n/a	chrXIII 670,694	Peripheral membrane protein of peroxisomes involved in peroxisomal inheritance recruitment to peroxisomes is mediated by interaction with Pex3p at the peroxisomal membrane
35	VPS20	YMR077C	391	n/a	chrXIII 421,816	Myristoylated subunit of ESCRTIII, the endosomal sorting complex required for transport of transmembrane proteins into the multivesicular body pathway to the lysosomal/vacuolar lumen cytoplasmic protein recruited to endosomal membranes
36	KRE28	YDR532C	391	n/a	chrIV 1,499,974	Subunit of a kinetochore-microtubule binding complex with Spc105p that bridges centromeric heterochromatin and kinetochore MAPs and motors, and is also required for sister chromatid bi-orientation and kinetochore binding of SAC components
37	PEX10	YDR265W	391	n/a	chrIV 999,370	Peroxisomal membrane E3 ubiquitin ligase, required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import contains zinc-binding RING domain mutations in human homolog cause various peroxisomal disorders
38	YLR211C	YLR211C	391	n/a	chrXII 564,161	Putative protein of unknown function green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm YLR211C is not an essential gene ORF contains an intron
39	CNL1	YDR357C	391	n/a	chrIV 1,189,383	Protein of unknown function likely member of BLOC complex involved in endosomal cargo sorting null mutant is sensitive to drug inducing secretion of vacuolar cargo green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
40	PEX15	YOL044W	391	n/a	chrXV 247,725	Phosphorylated tail-anchored type II integral peroxisomal membrane protein required for peroxisome biogenesis, cells lacking Pex15p mislocalize peroxisomal matrix proteins to cytosol, overexpression results in impaired peroxisome assembly
41	PEX27	YOR193W	391	n/a	chrXV 711,011	Peripheral peroxisomal membrane protein involved in controlling peroxisome size and number, interacts with homologous protein Pex25p
42	OCA6	YDR067C	391	n/a	chrIV 583,128	Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae, which is a model system for studying positive-strand RNA virus replication null mutation confers sensitivity to tunicamycin and DTT
43	HMRA2	YCR096C	391	n/a	chrIII 293,358	Silenced copy of a2 at HMR similarity to Alpha2p required along with a1p for inhibiting expression of the HO endonuclease in a/alpha HO/HO diploid cells with an active mating-type interconversion system
44	YDR467C	YDR467C	391	n/a	chrIV 1,397,746	Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
45	YDL009C	YDL009C	391	n/a	chrIV 433,086	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data partially overlaps the uncharacterized ORF YDL010W YDL009C is not an essential gene
46	YDR199W	YDR199W	391	n/a	chrIV 854,357	Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data partially overlaps the verified gene VPS64 computationally predicted to have thiol-disulfide oxidoreductase activity